Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0148 |
Symbol | |
ID | 8223714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 163667 |
End bp | 164422 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644928027 |
Product | two component transcriptional regulator, LytTR family |
Protein accession | YP_003084584 |
Protein GI | 255033963 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.48043 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAAA CACTGATTAT CGATGACGAA CAGAAAGCAC GCAATGTTCT GAATCACTAC CTGAACAGCT CGGTCAGGCA AGAGGTCGAC ATCCGGCATG CCGAGTCGGT CAAAGAAGCG CTGAAAGTAT TGGAAAGCTT CCAGCCCGAC ATTGTTTTTC TGGATGTGGA AATGCCGCAC CAAAACGGCT TCGAGTTTTT GCTGGCCAGA AAAAATCCGC CCTACGACAT CGTCTTCACG ACGGCTTTCA ACCAGTATGC CATCCAGGCG ATCCGGTTCA GCGCGCTCGA CTACCTCCTC AAACCGGTAG ATCCCGAAGA ACTGCAATCG GCGATAGACC GTCACATCGA AAAAGTGAAG GAAAAACCGA AGCAGGAAAC GCAGCAGCTC TACGACAATC TCGTCCACAA TATCGAGAAG AAGAACATCC GCGATTTCCG GCTCGCCGTT CCGTCGAGCG AAGGTGTATT TTTCTTTACG CTCGACGAAA TTCTCCGTTT GGAAGCCGAT AAGAACTACA CGGCAATTCA CCTGATCGGA AAACGGCCGT TTCTGGCGAG TAAAACGCTG AAACATTTCG ACGAAATGCT GGGAGAATTT AATTTCATCA GAACGCATAA ATCGCACCTC GTAAATCCGA AGTACATTAA GCAGGTGACG CACAACAACC AGTTCCTGCT GCTGTCGGAC GGTTCGAGGA TCGAGATTTC GCGACGGAAG AAGGAGCTGG TTCAGCAGTA TCTGAAATTG AAATGA
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Protein sequence | MLKTLIIDDE QKARNVLNHY LNSSVRQEVD IRHAESVKEA LKVLESFQPD IVFLDVEMPH QNGFEFLLAR KNPPYDIVFT TAFNQYAIQA IRFSALDYLL KPVDPEELQS AIDRHIEKVK EKPKQETQQL YDNLVHNIEK KNIRDFRLAV PSSEGVFFFT LDEILRLEAD KNYTAIHLIG KRPFLASKTL KHFDEMLGEF NFIRTHKSHL VNPKYIKQVT HNNQFLLLSD GSRIEISRRK KELVQQYLKL K
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