| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_00400 |
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| Symbol | |
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| ID | 8393932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 49643 |
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| End bp | 50356 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644984814 |
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| Product | response regulator of the LytR/AlgR family |
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| Protein accession | YP_003142464 |
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| Protein GI | 257062792 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.132657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTTAAGG CGATTATCGT AGATGACGAG GCTCCGGCAC GGTCCGAATT GCGGTACCTG
CTGGATGAAA TCGGCAATGT GGATGTCGTT GCCGAGGCAG CAAGCGTACG CGAAGCCATC
GAGAAAATGA AGAGCTTCCC GATCGACGCG CTCTTTCTTG ACGTGAATAT GCCCGAGGCC
AACGGCCTGC AGTTCGCGGA TGCCCTGCAG CACCTGACCA ACCCGCCGGC GGTCATCTTC
GTTACGGCCT ACAGCGAGCA CGCCCTCGAA GGTTTCAACG TGAACGCCGT GGATTACCTG
GTCAAACCCG TGGAAACCGA TCGTTTGCGC CAAGCTGTCG GCCGCGCCAA CGAGTATGTG
ATGCTCCACA TGAAGGCCAA CCAGGCCGAG CGCATCCCGG TGGAAAAGGG TGGCAAGAAG
ATTCTCATCC ACATCGACTC GATCCGCTTC GTCATGGCTC GCGATGACTA TGCCTACCTG
CAGACCGATA CCGACCGTTA CTTCTCCACA GTGTCTCTGG CCCAGTTGGA AAAGCGCCTC
GACGGCCACG GGTTCTTCCG CGTGCACCGC GGTTACCTGG TCAATCTTGA CATGGTGAAG
GAAGTCGAGC CTGTTTCAGG CGGCACTCTG CTGCTCACGC TGGACGGCAC CGACGAGAAG
ATTCCCGTTT CCCGCCGCCG CGTTTCTGCT TTGAAGAAGG CTTTGGGCCT ATAG
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| Protein sequence | MLKAIIVDDE APARSELRYL LDEIGNVDVV AEAASVREAI EKMKSFPIDA LFLDVNMPEA
NGLQFADALQ HLTNPPAVIF VTAYSEHALE GFNVNAVDYL VKPVETDRLR QAVGRANEYV
MLHMKANQAE RIPVEKGGKK ILIHIDSIRF VMARDDYAYL QTDTDRYFST VSLAQLEKRL
DGHGFFRVHR GYLVNLDMVK EVEPVSGGTL LLTLDGTDEK IPVSRRRVSA LKKALGL
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