| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5645 |
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| Symbol | |
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| ID | 8229261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6782983 |
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| End bp | 6783729 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644933492 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003090000 |
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| Protein GI | 255039379 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.954414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.925082 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAAAAG CGCTGATCAT CGACGACGAG CCCAGGGCAC GTAACGTTTT GCACCAGTTT
ATCGTGAGTT TCGTGCCCGA GATCATCGAG GTGCGAACGG CATCATCTGT TGAAGAAGCT
CAGGGGGTAA TGGAATACTA CAAGCCGGAC CTCGTTTTTC TGGATGTGGA GATGCCTTAC
AAAAACGGCT TCGATTTCTT GCAGATCCCG AACATGCCCG AATTCGACGT GATCTTCACC
ACGGCCTACA ACCAGTACGC CATCCAGGCG ATCCGCTTCA GTGCGCTCGA CTACCTGCTC
AAACCCATCA GCCCGGAAGA CCTGCGGGCG GCCGTGAAGC GGCATTTCAC AAAGGGAGAA
AGCTTCCGGC AGCGAAAACT GCTTCTTGAC AACCTCGCCG CCAACATCGA CAAGCGCGAC
GTGAAGGATT TCAGGCTTGC GGTGCCGTCC AGCGAAGGTG TTTTCTTCTT CATGATCCAC
GAAATACTCC GCCTCGAAGC CGATCGCAAC TACACCATCA TCCATCTGAT CAACAAGAGG
CCGTTCATCG CGAGCAAAAC GCTGAAACAT TTTGAGGATA TGCTCTCAAA ATTCCGGTTT
ATAAGAACCC ACAAATCGCA TTTGGTCAAC CTCGACCACA TTATCCGGAT CAGCAACAAC
AACGAATTCA TCATCCTCTC CGACGGCTCG CGGATCGAGG TGTCGCGGCG GAAAAAGGAT
GAAGTGCAGC GGCAGCTGAA CATCTGA
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| Protein sequence | MIKALIIDDE PRARNVLHQF IVSFVPEIIE VRTASSVEEA QGVMEYYKPD LVFLDVEMPY
KNGFDFLQIP NMPEFDVIFT TAYNQYAIQA IRFSALDYLL KPISPEDLRA AVKRHFTKGE
SFRQRKLLLD NLAANIDKRD VKDFRLAVPS SEGVFFFMIH EILRLEADRN YTIIHLINKR
PFIASKTLKH FEDMLSKFRF IRTHKSHLVN LDHIIRISNN NEFIILSDGS RIEVSRRKKD
EVQRQLNI
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