| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4010 |
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| Symbol | |
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| ID | 8360183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4989359 |
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| End bp | 4990054 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644966184 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003123673 |
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| Protein GI | 256423020 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0569074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00157623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAACTGCC TTATTATAGA CGACAACAAG CTGGCGCGTA CCGCCATGAA ACAATTAGTC
AGCCATGTGG ATCAGCTCCA GGTGGCCGGT GAATGTGCCA GTGCCATAGA GGCGTATAAT
ATGTTGCAGA AAGAAAAGAT AGACCTGCTC CTCCTGGATA TAGAAATGCC GGGAATGAAC
GGCCTGGAAC TAACGCGTAA TATAGGGAAG AATGGTCCGG TGATCATCTT TACGACAGCA
AAAAAAGACT ACGCCGTGGA AGCATTCGAA CTGCACGTAG CCGACTATCT CATTAAACCG
GTCACACCTG CCCGTTTTAT ACAGGCCATC GAAAGAGCAA AGGAGTTACA GCAGGCCGGC
ACAAAAGAAG TACACGACAC AGATAATGAG TTCATCTTTA TCAGAGACAG CGGCATCTTA
AAACGGGTTA AACTCGACGA TATCCTGTAC CTGGAAGCGA TGGGCGATTA TGTCAAACTA
CATACTGCGC AGAAATTTCA TGCCGTACAT TCTACCTTGA AAGCGATTGA AGAACGCCTG
CCTGGCGCAA GATTTATGAG AGTACATCGC TCTTATATCG TAGCATTAGA TAAGATCGAT
TCCATCGAAG ACGGCGCGAT TATCATTGCT AAAAATGCAG TGCCGGTGGC GGATGCTTAC
CGTGCAGCGC TGAATAGCAA ACTGAATCTT TTATAA
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| Protein sequence | MNCLIIDDNK LARTAMKQLV SHVDQLQVAG ECASAIEAYN MLQKEKIDLL LLDIEMPGMN
GLELTRNIGK NGPVIIFTTA KKDYAVEAFE LHVADYLIKP VTPARFIQAI ERAKELQQAG
TKEVHDTDNE FIFIRDSGIL KRVKLDDILY LEAMGDYVKL HTAQKFHAVH STLKAIEERL
PGARFMRVHR SYIVALDKID SIEDGAIIIA KNAVPVADAY RAALNSKLNL L
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