| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0444 |
|---|
| Symbol | |
|---|
| ID | 4283388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 524930 |
|---|
| End bp | 525718 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638137331 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_753152 |
|---|
| Protein GI | 114565998 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCTTTAA GAGTTTTGAT TGTAGATGAC GATGAGCGGG AAAGAATAGT GCTTCGTTAT
TTGCTGGAAC AAATTAACGA ATTGGAAATA GTAGGAGAAG CACTTCATGG TCTTGAGGCT
CTTATGATCT GCCAGGAAAA AAAGGTGGAT TTAGTATTTC TGGATATTAC TATGCCCGAA
ATGGGTGGTT TGGAGACAGC AGAAAAATTA CGAGAATTAA AATCTCCCCC CCTTTTCGCT
TTTGTTACTG TTAAAAAAGA TATGGCGGTA AAAGCATTTG AGATGGGGGC TTTAGATTAT
ATTGTTAAAC CAATAGAGCA GAAGCGAATT GACAAGACCA TTCAAAGGGC GCGCTTTCAA
ATAGCTCATT GGACCGCCAT TGAAGATATG GTAAGAAATA GAGTTAAAGA TCGCATCGAT
TTTATTCTAG AAACCTGCAA AGATATGGAG AGTTATTCCA ACAGGCTGAT TGTTCGCGAG
AAAGGAAAAA TCAGTCTCGT TAACCAGCCT GATATTATTT ATTGTGAAAG CCAGGGCAAA
AAAGTGCAGA TCTGTACTTG CCGGCAAAAT TTTATGAGCA ACTATACCCT TAATGCATTA
GAGAATATTC TGGATGAGAG ATACTTTTTT CGAGCTCACC AGGCTTTTAT TGTGAATGTT
AACTATATTA GGGAAGTCAT AAATCTGGGA GAAGGTTCCT ATATTTTGCA CCTGGCTAAT
TGTGATAAAG ATATCATCCT GAGTAGAGCC AAGGCAAGAT TACTAAGGAA CAAGATGGGA
ATAACTTAG
|
|---|
| Protein sequence | MPLRVLIVDD DERERIVLRY LLEQINELEI VGEALHGLEA LMICQEKKVD LVFLDITMPE
MGGLETAEKL RELKSPPLFA FVTVKKDMAV KAFEMGALDY IVKPIEQKRI DKTIQRARFQ
IAHWTAIEDM VRNRVKDRID FILETCKDME SYSNRLIVRE KGKISLVNQP DIIYCESQGK
KVQICTCRQN FMSNYTLNAL ENILDERYFF RAHQAFIVNV NYIREVINLG EGSYILHLAN
CDKDIILSRA KARLLRNKMG IT
|
|---|
| |