More than 300 homologs were found in PanDaTox collection
for query gene Jden_2242 on replicon NC_013174
Organism: Jonesia denitrificans DSM 20603



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013174  Jden_2242  binding-protein-dependent transport systems inner membrane component  100 
 
 
311 aa  614  1e-175  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.556058 
 
 
-
 
NC_013521  Sked_18860  carbohydrate ABC transporter membrane protein  80.14 
 
 
316 aa  440  9.999999999999999e-123  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.346815 
 
 
-
 
NC_012669  Bcav_0896  binding-protein-dependent transport systems inner membrane component  76.53 
 
 
314 aa  406  1.0000000000000001e-112  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17142  normal  0.200389 
 
 
-
 
NC_009664  Krad_0295  binding-protein-dependent transport systems inner membrane component  56.77 
 
 
306 aa  343  1e-93  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0472746 
 
 
-
 
NC_008541  Arth_2946  binding-protein-dependent transport systems inner membrane component  53.87 
 
 
316 aa  301  1e-80  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2661  binding-protein-dependent transport systems inner membrane component  54.7 
 
 
320 aa  298  8e-80  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  51.16 
 
 
306 aa  295  5e-79  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12850  sn-glycerol-3-phosphate transport integral membrane protein ABC transporter ugpA  48.81 
 
 
303 aa  275  1.0000000000000001e-72  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00000000170243  normal 
 
 
-
 
NC_013172  Bfae_29890  carbohydrate ABC transporter membrane protein  51.42 
 
 
333 aa  273  4.0000000000000004e-72  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3529  binding-protein-dependent transport systems inner membrane component  40.91 
 
 
311 aa  258  8e-68  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4568  binding-protein-dependent transport systems inner membrane component  44.52 
 
 
352 aa  253  3e-66  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  46.05 
 
 
306 aa  251  1e-65  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_012669  Bcav_1506  binding-protein-dependent transport systems inner membrane component  49.3 
 
 
319 aa  247  2e-64  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.172357  normal 
 
 
-
 
NC_009767  Rcas_0115  binding-protein-dependent transport systems inner membrane component  48.51 
 
 
303 aa  245  9e-64  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.013229  normal 
 
 
-
 
NC_012669  Bcav_1529  binding-protein-dependent transport systems inner membrane component  43.42 
 
 
318 aa  231  1e-59  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.165529  normal  0.149292 
 
 
-
 
NC_013172  Bfae_30860  permease component of ABC-type sugar transporter  43.42 
 
 
350 aa  224  2e-57  Brachybacterium faecium DSM 4810  Bacteria  normal  0.99166  n/a   
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  42.76 
 
 
307 aa  221  1.9999999999999999e-56  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  42.76 
 
 
307 aa  221  1.9999999999999999e-56  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  39.72 
 
 
292 aa  208  7e-53  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  41.52 
 
 
294 aa  202  6e-51  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  38.41 
 
 
305 aa  201  9.999999999999999e-51  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  38.74 
 
 
318 aa  200  1.9999999999999998e-50  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  38.08 
 
 
318 aa  198  1.0000000000000001e-49  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  38.24 
 
 
320 aa  196  4.0000000000000005e-49  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  36.96 
 
 
310 aa  196  5.000000000000001e-49  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  36.59 
 
 
310 aa  194  2e-48  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  36.59 
 
 
310 aa  194  2e-48  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0146  binding-protein-dependent transport systems inner membrane component  41.4 
 
 
292 aa  194  2e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0896196  normal 
 
 
-
 
NC_005945  BAS0536  glycerol-3-phosphate ABC transporter permease  36.59 
 
 
310 aa  193  3e-48  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  36.96 
 
 
310 aa  193  3e-48  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_0567  glycerol-3-phosphate ABC transporter permease protein  36.59 
 
 
310 aa  193  3e-48  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  36.96 
 
 
310 aa  193  3e-48  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  36.59 
 
 
310 aa  193  4e-48  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  38.76 
 
 
321 aa  192  4e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_0623  putative glycerol-3-phosphate ABC transporter, permease protein  36.59 
 
 
310 aa  193  4e-48  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_0478  glycerol-3-phosphate ABC transporter, permease  36.59 
 
 
310 aa  192  6e-48  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  37.26 
 
 
313 aa  191  2e-47  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  36.67 
 
 
299 aa  190  2e-47  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_28370  carbohydrate ABC transporter membrane protein  38.85 
 
 
287 aa  189  4e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  0.096742  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  38.83 
 
 
316 aa  189  8e-47  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  37.06 
 
 
313 aa  187  2e-46  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  36.27 
 
 
306 aa  186  4e-46  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  38.61 
 
 
309 aa  186  4e-46  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_010003  Pmob_0288  binding-protein-dependent transport systems inner membrane component  35.42 
 
 
290 aa  186  5e-46  Petrotoga mobilis SJ95  Bacteria  hitchhiker  0.00066862  n/a   
 
 
-
 
NC_010001  Cphy_0290  binding-protein-dependent transport systems inner membrane component  38.69 
 
 
297 aa  183  3e-45  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  38.55 
 
 
309 aa  182  6e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_009784  VIBHAR_06397  hypothetical protein  38.38 
 
 
293 aa  182  7e-45  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  36.54 
 
 
316 aa  182  8.000000000000001e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_4189  binding-protein-dependent transport systems inner membrane component  36.17 
 
 
293 aa  182  9.000000000000001e-45  Paracoccus denitrificans PD1222  Bacteria  normal  0.689523  normal  0.199959 
 
 
-
 
NC_014165  Tbis_3250  binding-protein-dependent transporter inner membrane component  38.1 
 
 
310 aa  182  9.000000000000001e-45  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  36.57 
 
 
309 aa  181  1e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_4882  binding-protein-dependent transport systems inner membrane component  36.88 
 
 
313 aa  181  2e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.115668  normal 
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  38.93 
 
 
283 aa  181  2e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  39.21 
 
 
316 aa  180  2.9999999999999997e-44  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  35.08 
 
 
315 aa  179  4.999999999999999e-44  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_011992  Dtpsy_0790  binding-protein-dependent transport systems inner membrane component  35.48 
 
 
293 aa  179  5.999999999999999e-44  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  37.68 
 
 
308 aa  178  8e-44  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  33.55 
 
 
308 aa  178  9e-44  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0861  binding-protein-dependent transport systems inner membrane component  35.48 
 
 
293 aa  178  9e-44  Acidovorax sp. JS42  Bacteria  normal  normal  0.533828 
 
 
-
 
NC_003295  RSc1265  SN-glycerol-3-phosphate transmembrane ABC transporter protein  35.59 
 
 
293 aa  178  1e-43  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3289  ABC glycerol-3-phosphate transporter, inner membrane subunit UgpA  37.28 
 
 
293 aa  178  1e-43  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  38.83 
 
 
310 aa  177  1e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2009  binding-protein-dependent transport systems inner membrane component  37.12 
 
 
291 aa  178  1e-43  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  31.07 
 
 
310 aa  178  1e-43  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1695  binding-protein-dependent transport systems inner membrane component  36.23 
 
 
288 aa  178  1e-43  Thermotoga sp. RQ2  Bacteria  normal  0.967188  n/a   
 
 
-
 
NC_009429  Rsph17025_3284  maltose-binding periplasmic protein  37.68 
 
 
293 aa  177  2e-43  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0588261  normal 
 
 
-
 
NC_009616  Tmel_0752  binding-protein-dependent transport systems inner membrane component  34.78 
 
 
288 aa  177  2e-43  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  35.66 
 
 
316 aa  177  2e-43  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_012791  Vapar_4135  binding-protein-dependent transport systems inner membrane component  36.69 
 
 
293 aa  177  3e-43  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  35 
 
 
299 aa  176  3e-43  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_012856  Rpic12D_1186  binding-protein-dependent transport systems inner membrane component  36.3 
 
 
293 aa  176  3e-43  Ralstonia pickettii 12D  Bacteria  normal  0.0963268  normal 
 
 
-
 
NC_010682  Rpic_1093  binding-protein-dependent transport systems inner membrane component  36.3 
 
 
293 aa  176  3e-43  Ralstonia pickettii 12J  Bacteria  normal  0.0106698  normal 
 
 
-
 
NC_008751  Dvul_0223  binding-protein-dependent transport systems inner membrane component  36.73 
 
 
293 aa  176  4e-43  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_4021  binding-protein-dependent transport systems inner membrane component  36.92 
 
 
293 aa  176  4e-43  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0720  binding-protein-dependent transport systems inner membrane component  35.42 
 
 
290 aa  176  5e-43  Petrotoga mobilis SJ95  Bacteria  normal  0.978604  n/a   
 
 
-
 
NC_004311  BRA1182  sugar ABC transporter, permease protein, putative  32.62 
 
 
319 aa  176  7e-43  Brucella suis 1330  Bacteria  normal  0.547049  n/a   
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  39.86 
 
 
309 aa  175  8e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  37.04 
 
 
320 aa  175  9e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  34.43 
 
 
317 aa  174  9.999999999999999e-43  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  35.69 
 
 
317 aa  175  9.999999999999999e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  36.46 
 
 
305 aa  174  9.999999999999999e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_013172  Bfae_29410  carbohydrate ABC transporter membrane protein  37.13 
 
 
322 aa  175  9.999999999999999e-43  Brachybacterium faecium DSM 4810  Bacteria  normal  0.899558  n/a   
 
 
-
 
NC_012880  Dd703_0068  binding-protein-dependent transport systems inner membrane component  36.5 
 
 
315 aa  174  1.9999999999999998e-42  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3651  binding-protein-dependent transport systems inner membrane component  34.88 
 
 
301 aa  174  1.9999999999999998e-42  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0332234  normal 
 
 
-
 
NC_009504  BOV_A1085  putative sugar ABC transporter, permease protein  33.07 
 
 
319 aa  174  1.9999999999999998e-42  Brucella ovis ATCC 25840  Bacteria  normal  0.589946  n/a   
 
 
-
 
NC_013174  Jden_2071  binding-protein-dependent transport systems inner membrane component  34.42 
 
 
345 aa  173  3.9999999999999995e-42  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.0000672298  normal 
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  32.27 
 
 
315 aa  172  3.9999999999999995e-42  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_1290  ABC transporter, permease protein  36.67 
 
 
311 aa  172  5e-42  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  40.84 
 
 
287 aa  172  5.999999999999999e-42  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_2054  binding-protein-dependent transport systems inner membrane component  37.14 
 
 
293 aa  172  6.999999999999999e-42  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  34.29 
 
 
308 aa  172  7.999999999999999e-42  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2094  sn-glycerol-3-phosphate transport system, binding protein inner membrane component  34.4 
 
 
293 aa  171  1e-41  Psychromonas ingrahamii 37  Bacteria  normal  0.236232  normal  0.396031 
 
 
-
 
NC_013721  HMPREF0424_1315  ABC transporter, permease protein  38.11 
 
 
301 aa  171  1e-41  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_009664  Krad_0116  binding-protein-dependent transport systems inner membrane component  34.2 
 
 
317 aa  171  1e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.156333  normal  0.563407 
 
 
-
 
NC_010184  BcerKBAB4_2801  binding-protein-dependent transport systems inner membrane component  35 
 
 
288 aa  171  2e-41  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.254018  n/a   
 
 
-
 
NC_007963  Csal_2737  binding-protein-dependent transport systems inner membrane component  35.48 
 
 
292 aa  171  2e-41  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.161235  n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  37.41 
 
 
317 aa  170  2e-41  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_012669  Bcav_1699  binding-protein-dependent transport systems inner membrane component  36.15 
 
 
315 aa  170  2e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.258357  normal 
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
320 aa  171  2e-41  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_013521  Sked_00810  permease component of ABC-type sugar transporter  37.37 
 
 
305 aa  171  2e-41  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0124807  normal  0.184811 
 
 
-
 
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