More than 300 homologs were found in PanDaTox collection
for query gene Cphy_0290 on replicon NC_010001
Organism: Clostridium phytofermentans ISDg



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010001  Cphy_0290  binding-protein-dependent transport systems inner membrane component  100 
 
 
297 aa  591  1e-168  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  52.9 
 
 
309 aa  290  2e-77  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  49.14 
 
 
320 aa  274  1.0000000000000001e-72  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  47.31 
 
 
310 aa  268  7e-71  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  48.8 
 
 
318 aa  267  2e-70  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  47.64 
 
 
318 aa  265  7e-70  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_013172  Bfae_29020  carbohydrate ABC transporter membrane protein  46.32 
 
 
275 aa  248  1e-64  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3807  binding-protein-dependent transport systems inner membrane component  50 
 
 
316 aa  238  9e-62  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.922708  normal  0.915782 
 
 
-
 
NC_010001  Cphy_0527  binding-protein-dependent transport systems inner membrane component  43 
 
 
296 aa  224  2e-57  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000283647  n/a   
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  39.06 
 
 
308 aa  222  4.9999999999999996e-57  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  38.03 
 
 
316 aa  213  2.9999999999999995e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  41.96 
 
 
299 aa  211  1e-53  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  41.52 
 
 
306 aa  211  2e-53  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  39.12 
 
 
317 aa  201  9.999999999999999e-51  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  36.81 
 
 
305 aa  200  3e-50  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  39.78 
 
 
319 aa  199  3e-50  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  37.98 
 
 
288 aa  196  3e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  40.51 
 
 
307 aa  196  4.0000000000000005e-49  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  40.51 
 
 
307 aa  196  4.0000000000000005e-49  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  39.93 
 
 
306 aa  194  2e-48  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_009636  Smed_2314  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
310 aa  188  8e-47  Sinorhizobium medicae WSM419  Bacteria  normal  0.498676  normal  0.350334 
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  37.46 
 
 
300 aa  188  9e-47  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  36.43 
 
 
321 aa  188  1e-46  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_013521  Sked_21160  carbohydrate ABC transporter membrane protein  39.01 
 
 
314 aa  188  1e-46  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.103465  normal  0.100515 
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  38.81 
 
 
295 aa  187  3e-46  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0532  binding-protein-dependent transport systems inner membrane component  38.83 
 
 
311 aa  186  4e-46  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  36.43 
 
 
294 aa  186  4e-46  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  37.02 
 
 
318 aa  185  7e-46  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_013205  Aaci_0796  binding-protein-dependent transport systems inner membrane component  41.45 
 
 
312 aa  185  9e-46  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.633875  n/a   
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  36.43 
 
 
308 aa  184  1.0000000000000001e-45  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  36.9 
 
 
309 aa  184  1.0000000000000001e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  37.88 
 
 
313 aa  184  1.0000000000000001e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  36.99 
 
 
300 aa  185  1.0000000000000001e-45  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
306 aa  184  2.0000000000000003e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  36.1 
 
 
292 aa  184  2.0000000000000003e-45  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  36.9 
 
 
316 aa  183  3e-45  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_011884  Cyan7425_0944  binding-protein-dependent transport systems inner membrane component  39.23 
 
 
290 aa  182  5.0000000000000004e-45  Cyanothece sp. PCC 7425  Bacteria  normal  0.120711  normal  0.307929 
 
 
-
 
NC_010001  Cphy_3032  binding-protein-dependent transport systems inner membrane component  38.87 
 
 
307 aa  182  7e-45  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3323  binding-protein-dependent transport systems inner membrane component  37.33 
 
 
317 aa  181  1e-44  Arthrobacter sp. FB24  Bacteria  normal  0.0473972  n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  33.91 
 
 
309 aa  181  1e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_009664  Krad_0295  binding-protein-dependent transport systems inner membrane component  39.93 
 
 
306 aa  181  1e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0472746 
 
 
-
 
NC_013530  Xcel_0898  binding-protein-dependent transport systems inner membrane component  34.71 
 
 
319 aa  181  1e-44  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.14469  n/a   
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  35.47 
 
 
315 aa  181  2e-44  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2833  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
319 aa  180  2e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0200859  normal 
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  38.46 
 
 
299 aa  179  2.9999999999999997e-44  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  36.21 
 
 
315 aa  179  4e-44  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_013205  Aaci_0077  binding-protein-dependent transport systems inner membrane component  34.01 
 
 
311 aa  179  4e-44  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3401  binding-protein-dependent transport systems inner membrane component  35.69 
 
 
305 aa  179  4.999999999999999e-44  Clostridium phytofermentans ISDg  Bacteria  normal  0.028536  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  38.72 
 
 
317 aa  179  4.999999999999999e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  37.02 
 
 
294 aa  179  4.999999999999999e-44  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0321  binding-protein-dependent transport systems inner membrane component  40.25 
 
 
420 aa  178  1e-43  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  37.85 
 
 
316 aa  178  1e-43  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1699  binding-protein-dependent transport systems inner membrane component  34.69 
 
 
315 aa  178  1e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.258357  normal 
 
 
-
 
NC_009523  RoseRS_4568  binding-protein-dependent transport systems inner membrane component  34.74 
 
 
352 aa  177  2e-43  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_1616  binding-protein-dependent transport systems inner membrane component  40.98 
 
 
429 aa  177  2e-43  Thermosipho melanesiensis BI429  Bacteria  normal  0.225919  n/a   
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  37.76 
 
 
309 aa  177  2e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  33.11 
 
 
317 aa  177  2e-43  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_010483  TRQ2_0339  binding-protein-dependent transport systems inner membrane component  40.25 
 
 
420 aa  177  2e-43  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  38.08 
 
 
305 aa  177  2e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
313 aa  177  3e-43  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  38.1 
 
 
353 aa  176  4e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_014165  Tbis_2715  binding-protein-dependent transporter inner membrane component  33.83 
 
 
350 aa  176  4e-43  Thermobispora bispora DSM 43833  Bacteria  normal  0.392142  normal 
 
 
-
 
NC_011886  Achl_3074  binding-protein-dependent transport systems inner membrane component  35.05 
 
 
314 aa  175  6e-43  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  36.36 
 
 
310 aa  175  7e-43  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3122  binding-protein-dependent transport systems inner membrane component  36.43 
 
 
305 aa  175  7e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.99861  hitchhiker  0.000381845 
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  36.7 
 
 
310 aa  175  7e-43  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2071  binding-protein-dependent transport systems inner membrane component  35.82 
 
 
345 aa  175  7e-43  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.0000672298  normal 
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  36.46 
 
 
322 aa  175  8e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  36.36 
 
 
310 aa  175  8e-43  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_4197  binding-protein-dependent transport systems inner membrane component  32.5 
 
 
326 aa  174  9.999999999999999e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.979447  normal 
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  37.87 
 
 
312 aa  174  9.999999999999999e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_010320  Teth514_1100  binding-protein-dependent transport systems inner membrane component  35.84 
 
 
300 aa  174  9.999999999999999e-43  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  36.49 
 
 
310 aa  174  1.9999999999999998e-42  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  36.49 
 
 
310 aa  173  1.9999999999999998e-42  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  38.64 
 
 
305 aa  174  1.9999999999999998e-42  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  34.74 
 
 
321 aa  174  1.9999999999999998e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  36.36 
 
 
310 aa  173  2.9999999999999996e-42  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0623  putative glycerol-3-phosphate ABC transporter, permease protein  36.36 
 
 
310 aa  173  2.9999999999999996e-42  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011886  Achl_3123  binding-protein-dependent transport systems inner membrane component  36.64 
 
 
317 aa  173  2.9999999999999996e-42  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.205507 
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  39.11 
 
 
316 aa  172  3.9999999999999995e-42  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  35.07 
 
 
293 aa  172  3.9999999999999995e-42  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_012669  Bcav_2718  binding-protein-dependent transport systems inner membrane component  36.49 
 
 
330 aa  172  5e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.21265 
 
 
-
 
NC_012669  Bcav_1506  binding-protein-dependent transport systems inner membrane component  38.99 
 
 
319 aa  172  5.999999999999999e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.172357  normal 
 
 
-
 
NC_012917  PC1_3522  binding-protein-dependent transport systems inner membrane component  36.7 
 
 
331 aa  172  6.999999999999999e-42  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0478  glycerol-3-phosphate ABC transporter, permease  36.36 
 
 
310 aa  172  6.999999999999999e-42  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0536  glycerol-3-phosphate ABC transporter permease  36.03 
 
 
310 aa  171  1e-41  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0567  glycerol-3-phosphate ABC transporter permease protein  36.03 
 
 
310 aa  171  1e-41  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  36.52 
 
 
295 aa  171  1e-41  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_012669  Bcav_1656  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
318 aa  171  1e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.152531  normal  0.26367 
 
 
-
 
NC_013521  Sked_18860  carbohydrate ABC transporter membrane protein  39.78 
 
 
316 aa  171  1e-41  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.346815 
 
 
-
 
NC_012880  Dd703_0068  binding-protein-dependent transport systems inner membrane component  37.89 
 
 
315 aa  171  2e-41  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3147  binding-protein-dependent transport systems inner membrane component  38.72 
 
 
319 aa  171  2e-41  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00382098  n/a   
 
 
-
 
NC_013421  Pecwa_3671  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
332 aa  171  2e-41  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  35.21 
 
 
308 aa  171  2e-41  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  37.18 
 
 
300 aa  171  2e-41  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1290  binding-protein-dependent transport systems inner membrane component  36.46 
 
 
297 aa  171  2e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012912  Dd1591_1969  binding-protein-dependent transport systems inner membrane component  37.1 
 
 
296 aa  170  2e-41  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2080  binding-protein-dependent transport systems inner membrane component  39.12 
 
 
308 aa  171  2e-41  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.136718  n/a   
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  35.48 
 
 
320 aa  170  3e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_012880  Dd703_2034  binding-protein-dependent transport systems inner membrane component  37.1 
 
 
296 aa  170  3e-41  Dickeya dadantii Ech703  Bacteria  normal  0.963086  n/a   
 
 
-
 
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