Gene Jden_2071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2071 
Symbol 
ID8381230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2263056 
End bp2264093 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content55% 
IMG OID645004824 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003162012 
Protein GI256833285 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000672298 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGACA AGACTCAAGC ATCGGCCGTC GATGCAGGCC TGTCTGCGAC TCACGGATCA 
CAGACTCCGG CTGCTGGAGG TCGCACACCT TCAGCAGCCG GGTCTGAACC CGCACGTCGC
AAGGCAAAGC CAAACTACCG TCAGGCAATC GAAGCCGGGA TCTTCATCGC ACCAGCGCTG
GCGCTCTTCG CGTTCTTCGT CGTATGGCCC ATGATTAAGG CTGTACAGTT CTCCCTCTAC
AGATGGAAAG GGTTTGGCCC GCTCGTCGAC TTTGTGGGGC TCGACAACTA CATTCGCGTT
CTCCAAAATG ATGTCTTCAT TGGATCGCTC ACTCACAACC TCATCATCAT TGTTGCGTCG
ATCGCCATCC AGCTTCCTCT CGGGTTGCTG ATTGCCCTTC TTCTCAACCG GAAGATGTGG
GGCCGCGCAG CACTGCGAAC CATTGTGTTC GTCCCCTATG TTCTTGCTGA AGTGATCGTT
GGTGTCATCT GGTTCCAGAT GCTCCAACCG AACTACGGCG CGATCGCGGT GGTTCTCGAT
GCAGTAGGTA TCCAAGGTCC ACCTCAAGGG TTCCTTGGCA CCGTTGAGCT TGCACTTCCC
ACCTTGATGG TTGTGTTGAC CTGGAAGTTT CTTGGGTTCG CTATCATCTT GTTCCTTGCC
GGGCTGCAAG GAGTCCCTGA AGAACTGCAT GAAGCAGCAC AGATCGATGG TGCTTCATGG
TGGCAGACTC AGGTGAAAAT CACCATTCCT TTGATTGGCC CTACCCTTCG CACCTGGGCG
TTCCTTTCCA TGGTCGGATC ACTCCAGCTC TTTGACATGG TGTGGATCCT CACCAAGGGT
GGACCAGCGA ACGCAACAAC AACGATGGTC ACGTTCCTCA TCAATGAAGG AACGAAGCGG
TCAAACTACG GGATCGCTTC TGCCGCCTCC GTTGTCCTCT TCATCATTGC CCTGGTCTTC
GCGCTCGTCT ACCAGCGCTT CGTCTTGCGG CGAGACAACC CTGACATCGA ACCTCAGCGA
AAGAAGGTGA CCCGATGA
 
Protein sequence
MADKTQASAV DAGLSATHGS QTPAAGGRTP SAAGSEPARR KAKPNYRQAI EAGIFIAPAL 
ALFAFFVVWP MIKAVQFSLY RWKGFGPLVD FVGLDNYIRV LQNDVFIGSL THNLIIIVAS
IAIQLPLGLL IALLLNRKMW GRAALRTIVF VPYVLAEVIV GVIWFQMLQP NYGAIAVVLD
AVGIQGPPQG FLGTVELALP TLMVVLTWKF LGFAIILFLA GLQGVPEELH EAAQIDGASW
WQTQVKITIP LIGPTLRTWA FLSMVGSLQL FDMVWILTKG GPANATTTMV TFLINEGTKR
SNYGIASAAS VVLFIIALVF ALVYQRFVLR RDNPDIEPQR KKVTR