Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_2071 |
Symbol | |
ID | 8381230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 2263056 |
End bp | 2264093 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 645004824 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003162012 |
Protein GI | 256833285 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000672298 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAGACA AGACTCAAGC ATCGGCCGTC GATGCAGGCC TGTCTGCGAC TCACGGATCA CAGACTCCGG CTGCTGGAGG TCGCACACCT TCAGCAGCCG GGTCTGAACC CGCACGTCGC AAGGCAAAGC CAAACTACCG TCAGGCAATC GAAGCCGGGA TCTTCATCGC ACCAGCGCTG GCGCTCTTCG CGTTCTTCGT CGTATGGCCC ATGATTAAGG CTGTACAGTT CTCCCTCTAC AGATGGAAAG GGTTTGGCCC GCTCGTCGAC TTTGTGGGGC TCGACAACTA CATTCGCGTT CTCCAAAATG ATGTCTTCAT TGGATCGCTC ACTCACAACC TCATCATCAT TGTTGCGTCG ATCGCCATCC AGCTTCCTCT CGGGTTGCTG ATTGCCCTTC TTCTCAACCG GAAGATGTGG GGCCGCGCAG CACTGCGAAC CATTGTGTTC GTCCCCTATG TTCTTGCTGA AGTGATCGTT GGTGTCATCT GGTTCCAGAT GCTCCAACCG AACTACGGCG CGATCGCGGT GGTTCTCGAT GCAGTAGGTA TCCAAGGTCC ACCTCAAGGG TTCCTTGGCA CCGTTGAGCT TGCACTTCCC ACCTTGATGG TTGTGTTGAC CTGGAAGTTT CTTGGGTTCG CTATCATCTT GTTCCTTGCC GGGCTGCAAG GAGTCCCTGA AGAACTGCAT GAAGCAGCAC AGATCGATGG TGCTTCATGG TGGCAGACTC AGGTGAAAAT CACCATTCCT TTGATTGGCC CTACCCTTCG CACCTGGGCG TTCCTTTCCA TGGTCGGATC ACTCCAGCTC TTTGACATGG TGTGGATCCT CACCAAGGGT GGACCAGCGA ACGCAACAAC AACGATGGTC ACGTTCCTCA TCAATGAAGG AACGAAGCGG TCAAACTACG GGATCGCTTC TGCCGCCTCC GTTGTCCTCT TCATCATTGC CCTGGTCTTC GCGCTCGTCT ACCAGCGCTT CGTCTTGCGG CGAGACAACC CTGACATCGA ACCTCAGCGA AAGAAGGTGA CCCGATGA
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Protein sequence | MADKTQASAV DAGLSATHGS QTPAAGGRTP SAAGSEPARR KAKPNYRQAI EAGIFIAPAL ALFAFFVVWP MIKAVQFSLY RWKGFGPLVD FVGLDNYIRV LQNDVFIGSL THNLIIIVAS IAIQLPLGLL IALLLNRKMW GRAALRTIVF VPYVLAEVIV GVIWFQMLQP NYGAIAVVLD AVGIQGPPQG FLGTVELALP TLMVVLTWKF LGFAIILFLA GLQGVPEELH EAAQIDGASW WQTQVKITIP LIGPTLRTWA FLSMVGSLQL FDMVWILTKG GPANATTTMV TFLINEGTKR SNYGIASAAS VVLFIIALVF ALVYQRFVLR RDNPDIEPQR KKVTR
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