| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2545 |
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| Symbol | |
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| ID | 5540027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3285107 |
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| End bp | 3286057 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640894675 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001432642 |
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| Protein GI | 156742513 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.637107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.115222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGAG CGCAGCGACG AATCGATCAA ACAGTGGCGC GACCGATAGG CAAGCCCAAA
CTGGGGAAAC TGGCGCGCCG TGAAGAGCGT GAGTTCTATC TGTTCATTTC CCTCTGGATC
ATCGGGTTTA TTGCGTTCGA CGCCGGACCA ATCATTGCAT CGCTGGCGAT CAGTTTCACC
AACTGGTCGA TGATGACGCC GCCCTCCTGG ACCGGATTGC AAAATTATCA ACGCCTGATC
GCCGACCCGC TCTTCTATAC GGCAATGTGG AATTCGCTCT ATTTCGGTAT CGGCAGCGTC
GGTCTCGGTC TGATCGTCTC GTTTCTGCTG GCGTTGTTGC TCAATCAAAA AGTGCTGGGG
ATTTCGGTCT TTCGCACCGT TTTCTATCTG CCATCGGTCG TCAGCGGGAT TGCCGTCGCC
ATTTTGTGGA TCATGATCCT GCATCAGGAT TTCGGGCTGA TCAATACGGT GCTTTCCTGG
TTCGGCATCA AAGGTCCAGG GTGGCTGGTG CAACCGCAGT GGGCAAAACC GGCGCTGATC
CTGATGAGTC TGTGGGGCGC CGGCGGTTCG ATGGTGATCT ACCTCGCCGG TTTGCAGAGT
GTGCCGCAGC ACTTGTACGA AGCCGCCTCC ATCGATGGCG CCGGTCCGTG GATGAAATTC
TGGAACGTGA CCGTTCCGAT GATGTCGCCG GTCATCTTTT ATAACCTGAT CGTCGGGTTC
ATCGCCTCAC TCCAGGGGTT TGTGCTGGTG TTGATTATGA CCAACGGCGG ACCGGCGAAT
GCAACGTTGA TGTTCGGTCT GTATATCTAT CGGGTGGCGT TCCAGTTCTT CCAAATGGGG
TACGCCTCAG CACTGGCGTG GATTCTGCTG GTCGTCATTA TGATCATTAC GGCGCTGCAA
TTTCTGGGTG CGAAATACTG GGTGTTCTAC GAGGGTGAGA CGGCGCGTTG A
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| Protein sequence | MAGAQRRIDQ TVARPIGKPK LGKLARREER EFYLFISLWI IGFIAFDAGP IIASLAISFT
NWSMMTPPSW TGLQNYQRLI ADPLFYTAMW NSLYFGIGSV GLGLIVSFLL ALLLNQKVLG
ISVFRTVFYL PSVVSGIAVA ILWIMILHQD FGLINTVLSW FGIKGPGWLV QPQWAKPALI
LMSLWGAGGS MVIYLAGLQS VPQHLYEAAS IDGAGPWMKF WNVTVPMMSP VIFYNLIVGF
IASLQGFVLV LIMTNGGPAN ATLMFGLYIY RVAFQFFQMG YASALAWILL VVIMIITALQ
FLGAKYWVFY EGETAR
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