More than 300 homologs were found in PanDaTox collection
for query gene RoseRS_4568 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_4568  binding-protein-dependent transport systems inner membrane component  100 
 
 
352 aa  703    Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0115  binding-protein-dependent transport systems inner membrane component  81.06 
 
 
303 aa  462  1e-129  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.013229  normal 
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  57.86 
 
 
306 aa  340  2.9999999999999998e-92  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  48.94 
 
 
306 aa  296  3e-79  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1506  binding-protein-dependent transport systems inner membrane component  48.03 
 
 
319 aa  246  3e-64  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.172357  normal 
 
 
-
 
NC_011886  Achl_2661  binding-protein-dependent transport systems inner membrane component  42.21 
 
 
320 aa  234  2.0000000000000002e-60  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  42.72 
 
 
307 aa  233  3e-60  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  42.72 
 
 
307 aa  233  3e-60  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_008541  Arth_2946  binding-protein-dependent transport systems inner membrane component  42.68 
 
 
316 aa  233  4.0000000000000004e-60  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0295  binding-protein-dependent transport systems inner membrane component  39.68 
 
 
306 aa  231  1e-59  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0472746 
 
 
-
 
NC_014158  Tpau_3529  binding-protein-dependent transport systems inner membrane component  40 
 
 
311 aa  229  4e-59  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1529  binding-protein-dependent transport systems inner membrane component  38.76 
 
 
318 aa  229  6e-59  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.165529  normal  0.149292 
 
 
-
 
NC_012669  Bcav_0896  binding-protein-dependent transport systems inner membrane component  43.43 
 
 
314 aa  228  1e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17142  normal  0.200389 
 
 
-
 
NC_013521  Sked_18860  carbohydrate ABC transporter membrane protein  40.91 
 
 
316 aa  221  9.999999999999999e-57  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.346815 
 
 
-
 
NC_013172  Bfae_29890  carbohydrate ABC transporter membrane protein  40.91 
 
 
333 aa  213  3.9999999999999995e-54  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  41.8 
 
 
305 aa  213  3.9999999999999995e-54  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  38.44 
 
 
306 aa  211  1e-53  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  36.83 
 
 
299 aa  210  2e-53  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12850  sn-glycerol-3-phosphate transport integral membrane protein ABC transporter ugpA  40.38 
 
 
303 aa  208  1e-52  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00000000170243  normal 
 
 
-
 
NC_013174  Jden_2242  binding-protein-dependent transport systems inner membrane component  44.52 
 
 
311 aa  206  4e-52  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.556058 
 
 
-
 
NC_013172  Bfae_30860  permease component of ABC-type sugar transporter  39.09 
 
 
350 aa  204  2e-51  Brachybacterium faecium DSM 4810  Bacteria  normal  0.99166  n/a   
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  37.99 
 
 
313 aa  199  7e-50  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  35.49 
 
 
309 aa  197  3e-49  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  36.22 
 
 
310 aa  194  2e-48  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  37.42 
 
 
320 aa  194  2e-48  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  36.22 
 
 
310 aa  194  2e-48  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  34.45 
 
 
310 aa  192  6e-48  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  37.75 
 
 
318 aa  192  6e-48  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  36.22 
 
 
310 aa  192  7e-48  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS0536  glycerol-3-phosphate ABC transporter permease  36.22 
 
 
310 aa  192  8e-48  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0567  glycerol-3-phosphate ABC transporter permease protein  36.22 
 
 
310 aa  192  8e-48  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  35.58 
 
 
310 aa  192  8e-48  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  36.22 
 
 
310 aa  192  9e-48  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  38.08 
 
 
318 aa  192  9e-48  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_011773  BCAH820_0623  putative glycerol-3-phosphate ABC transporter, permease protein  36.22 
 
 
310 aa  192  9e-48  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_0478  glycerol-3-phosphate ABC transporter, permease  36.22 
 
 
310 aa  191  2e-47  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  36.15 
 
 
319 aa  191  2e-47  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_28370  carbohydrate ABC transporter membrane protein  35.39 
 
 
287 aa  189  5e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  0.096742  n/a   
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  33.54 
 
 
310 aa  189  5e-47  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  38.36 
 
 
309 aa  187  2e-46  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  36.89 
 
 
305 aa  187  3e-46  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4750  binding-protein-dependent transport systems inner membrane component  33.99 
 
 
299 aa  186  4e-46  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.62916  normal  0.701692 
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  33.75 
 
 
308 aa  186  4e-46  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0290  binding-protein-dependent transport systems inner membrane component  34.74 
 
 
297 aa  186  5e-46  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0563  binding-protein dependent transport system inner membrane protein  38.72 
 
 
294 aa  186  6e-46  Anabaena variabilis ATCC 29413  Bacteria  normal  0.22835  normal  0.0558608 
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  32.06 
 
 
308 aa  185  9e-46  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  34.69 
 
 
316 aa  185  9e-46  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  36.98 
 
 
294 aa  184  1.0000000000000001e-45  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  33.75 
 
 
315 aa  184  1.0000000000000001e-45  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_011884  Cyan7425_0944  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
290 aa  185  1.0000000000000001e-45  Cyanothece sp. PCC 7425  Bacteria  normal  0.120711  normal  0.307929 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  36.25 
 
 
292 aa  182  6e-45  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_011368  Rleg2_4663  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
299 aa  182  8.000000000000001e-45  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.456499 
 
 
-
 
NC_010001  Cphy_0527  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
296 aa  182  1e-44  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000283647  n/a   
 
 
-
 
NC_013411  GYMC61_2847  binding-protein-dependent transport systems inner membrane component  34.18 
 
 
318 aa  180  2.9999999999999997e-44  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  34.68 
 
 
312 aa  179  7e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  34.21 
 
 
305 aa  177  2e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  35.74 
 
 
321 aa  176  5e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  38.32 
 
 
316 aa  176  6e-43  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2847  binding-protein-dependent transport systems inner membrane component  35.45 
 
 
305 aa  175  9e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.661532 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  35.03 
 
 
316 aa  174  1.9999999999999998e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2615  binding-protein-dependent transport systems inner membrane component  36.59 
 
 
307 aa  174  1.9999999999999998e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000296099  n/a   
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  34.38 
 
 
314 aa  173  2.9999999999999996e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  31.82 
 
 
295 aa  174  2.9999999999999996e-42  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  41.54 
 
 
317 aa  173  3.9999999999999995e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_011899  Hore_20510  binding-protein-dependent transport systems inner membrane component  30.62 
 
 
290 aa  173  3.9999999999999995e-42  Halothermothrix orenii H 168  Bacteria  normal  0.0790749  n/a   
 
 
-
 
NC_012669  Bcav_2718  binding-protein-dependent transport systems inner membrane component  33.55 
 
 
330 aa  173  5e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.21265 
 
 
-
 
NC_011071  Smal_2682  binding-protein-dependent transport systems inner membrane component  37.92 
 
 
293 aa  172  5.999999999999999e-42  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.990678  normal 
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  37.13 
 
 
309 aa  172  6.999999999999999e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_1127  binding-protein-dependent transport systems inner membrane component  34.29 
 
 
328 aa  172  6.999999999999999e-42  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.190953  hitchhiker  0.00155627 
 
 
-
 
NC_010483  TRQ2_1695  binding-protein-dependent transport systems inner membrane component  33.12 
 
 
288 aa  172  7.999999999999999e-42  Thermotoga sp. RQ2  Bacteria  normal  0.967188  n/a   
 
 
-
 
NC_013721  HMPREF0424_1290  ABC transporter, permease protein  35.07 
 
 
311 aa  172  1e-41  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_009429  Rsph17025_3284  maltose-binding periplasmic protein  35.39 
 
 
293 aa  172  1e-41  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0588261  normal 
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  34.33 
 
 
300 aa  172  1e-41  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  32.25 
 
 
294 aa  171  2e-41  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  34.71 
 
 
317 aa  170  3e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0828  binding-protein-dependent transport systems inner membrane component  33.76 
 
 
316 aa  170  4e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.194369 
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  33.74 
 
 
353 aa  170  4e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_013526  Tter_2506  binding-protein-dependent transport systems inner membrane component  39.29 
 
 
306 aa  170  4e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000185658  n/a   
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  33.33 
 
 
315 aa  169  5e-41  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0146  binding-protein-dependent transport systems inner membrane component  33.77 
 
 
292 aa  169  5e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0896196  normal 
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  36.49 
 
 
310 aa  169  5e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29020  carbohydrate ABC transporter membrane protein  35.49 
 
 
275 aa  169  6e-41  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  35.41 
 
 
291 aa  169  6e-41  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_012669  Bcav_1523  binding-protein-dependent transport systems inner membrane component  39.29 
 
 
321 aa  169  8e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_11550  carbohydrate ABC transporter membrane protein  33.23 
 
 
354 aa  168  1e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal  0.0144146 
 
 
-
 
NC_007494  RSP_3289  ABC glycerol-3-phosphate transporter, inner membrane subunit UgpA  34.09 
 
 
293 aa  167  2e-40  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00881  ABC transporter sugar permease  37.79 
 
 
294 aa  167  2e-40  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0244413  n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  34.42 
 
 
309 aa  167  2e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_009050  Rsph17029_4021  binding-protein-dependent transport systems inner membrane component  34.09 
 
 
293 aa  167  2e-40  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
300 aa  167  2e-40  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  33.9 
 
 
300 aa  167  2.9999999999999998e-40  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  38.55 
 
 
293 aa  167  2.9999999999999998e-40  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0125  binding-protein-dependent transport systems inner membrane component  35.94 
 
 
302 aa  167  4e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  32.46 
 
 
318 aa  166  5e-40  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  35.48 
 
 
288 aa  166  6.9999999999999995e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  35.37 
 
 
308 aa  164  2.0000000000000002e-39  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_010184  BcerKBAB4_2801  binding-protein-dependent transport systems inner membrane component  34.88 
 
 
288 aa  164  2.0000000000000002e-39  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.254018  n/a   
 
 
-
 
NC_009667  Oant_0639  binding-protein-dependent transport systems inner membrane component  33.12 
 
 
305 aa  164  2.0000000000000002e-39  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.371496  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  32.34 
 
 
314 aa  163  3e-39  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0176  binding-protein dependent transport system inner membrane protein  35.02 
 
 
314 aa  163  3e-39  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
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