Gene Sked_00810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_00810 
Symbol 
ID8631719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp82872 
End bp83789 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content69% 
IMG OID 
Productpermease component of ABC-type sugar transporter 
Protein accessionYP_003312888 
Protein GI269793433 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0124807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.184811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCACC TGGCCACGAC CGGATCTCCG GCCACCCGCC CTAGACGCCG GAGTCGGGCG 
GCACCGTGGG CCGTCTGGGC GCTGGTCCCC ACAGCGGTCA CGCTCCTCGC CTTCAACTAC
TGGCCGCTGG TGCGTACCGC CGTGCTGTCG TTCCAGAGCT CCGACCTCTT CGGGCGACCG
TCCGGCTTCG TCGGGCTCGA CAACTACGCG ACGATGCTCG GGTCCGCCGA CTTCCGCCGG
ACCCTGGTCA TCACCTTCAC GTTCGTCGGA CTCAGCGTCG CAGCGAAGCT GGTCGTCGGG
ATGGCGCTCG CCGTCCCCCT CGCGGCGCGG CTGCGAGGCA CCGGGTTCTC CCGGGCGATC
GTCCTCATCC CCATGGCGGT GTCCGCCGCC GTCGCCGGCC TCGCGTTCCG TGCGCTCATG
AGCCCGACCT ACGGGCTGCT CGACCAGATC GCCATCTGGC TCACCGGACA GCCCGCAGGC
TGGATCACCG AGCCCACGAT GGCCATGGTG TCGATCGTCA TGGTCGACGT CTGGACGTCC
ATCGGCTTCG TCACCCTGCT GCTCATCGCG GCGATCGACG CCGTCCCGCC CGAGGTCGAC
GAGGCGGCCG CGATCGACGG CGCCTCACGT GCGCGGGTGC TCGCCTCGAT CACCGTCCCG
CTCATCACGC CGACCCTGTT CTTCCTCGTG GTGACGCAGT CGATCCAGGC GATGCGGGAG
TTCACGATCA TCCAGGTCGT GACAGGGGGT GGTCCGGCGC GCTCGACGCA GACCCTCGTG
TTCGACATCT GGGCCAAGGC CTTCAGCGGG ACTGCCGACT ACGGCGCGGC GTCAGCCCGC
GGGATCATCC TGCTCGTCAT CATCGCGGCC CTCACCGCAG TCCAGTTCGG GATCCTCGAG
CGGAAGGTGA GCTACTGA
 
Protein sequence
MPHLATTGSP ATRPRRRSRA APWAVWALVP TAVTLLAFNY WPLVRTAVLS FQSSDLFGRP 
SGFVGLDNYA TMLGSADFRR TLVITFTFVG LSVAAKLVVG MALAVPLAAR LRGTGFSRAI
VLIPMAVSAA VAGLAFRALM SPTYGLLDQI AIWLTGQPAG WITEPTMAMV SIVMVDVWTS
IGFVTLLLIA AIDAVPPEVD EAAAIDGASR ARVLASITVP LITPTLFFLV VTQSIQAMRE
FTIIQVVTGG GPARSTQTLV FDIWAKAFSG TADYGAASAR GIILLVIIAA LTAVQFGILE
RKVSY