Gene Dvul_0223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0223 
Symbol 
ID4662342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp271476 
End bp272357 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content61% 
IMG OID639818419 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_965674 
Protein GI120601274 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCAGAC CCGCCACCAT GCGGAACATT CATGCATGGC TGCTGCTTCT GCCAGCCATG 
GCCTTCATCG TGGCGTTCAC CCACGTTCCG GCGGTGAACA CCTTCATCCA CAGCTTCATG
CTGGACGGCA AGGGCGGTGC CCCTGCCACC TTCGTGGGCC TCGAACACTA CATGTACCTC
TTCGAGGACG AAGTGTTCCG CAAGGCGCTG GTGAACAACC TGCTCTTCGC CTCGGGCACC
ATCCCGCTCT CCATCGGCCT CGCCATGCTG ATGGCCTTTC TGGTGAACGC AGGGCTTGCG
GGCCAGTCCG TATTGCGGCT GTGCTACTTC GTGCCCACGG TGCTGCCCAT GATCGCCGTC
GCCAACATCT GGCTCTTCTT CTTCACGCCC GAGTACGGGC TGCTTGAACA GGTGCGTGGT
GCGCTGGGCT TTTCGGGCAT CAACTGGCTT GGCAACGAAT CGACGGCCCT GCCGTGCGTC
ATCGCCGTCG CCGTATGGAA GGACGCCGGC TTCTTCATGA TCTTCTACCT CGCCGCACTG
CAGCAGATTT CTCCGTCGCT GGGCGAGGCC GCCATGCTCG AAGGGGCATC GCGACTCTAT
TTCTACCGCC GCGTCGTCAT TCCGCTGCTC ATGCCCACGA CGCTCTTCGT GCTGGTCAAC
GCCACCATCA ACGCCTTCCG CATGGTCGAC CACCTCTTCG TCCTCACGCA GGGCGGCCCC
AACAACGCCA GTTCGTTGCT GCTCTACTAC ATCTACGAAG TGAGCTTCAA ATACTGGGAT
ACGGGCTACG GTGCGGCACT GACCATGGTG TTGCTGGCCT TCCTCGGACT GGCCTCCATC
GGGCAGTTCG GTTTCTTCGA GCGCAAGGTG CACTACAGAT GA
 
Protein sequence
MPRPATMRNI HAWLLLLPAM AFIVAFTHVP AVNTFIHSFM LDGKGGAPAT FVGLEHYMYL 
FEDEVFRKAL VNNLLFASGT IPLSIGLAML MAFLVNAGLA GQSVLRLCYF VPTVLPMIAV
ANIWLFFFTP EYGLLEQVRG ALGFSGINWL GNESTALPCV IAVAVWKDAG FFMIFYLAAL
QQISPSLGEA AMLEGASRLY FYRRVVIPLL MPTTLFVLVN ATINAFRMVD HLFVLTQGGP
NNASSLLLYY IYEVSFKYWD TGYGAALTMV LLAFLGLASI GQFGFFERKV HYR