Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3284 |
Symbol | |
ID | 5085775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 155002 |
End bp | 155883 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640484856 |
Product | maltose-binding periplasmic protein |
Protein accession | YP_001169473 |
Protein GI | 146279315 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0588261 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATCGTT CAACCTTTCC CCACCGTGTC CTGCCCTGGC TGCTGATCCT GCCTCAGCTG CTGATCTCGG CCGTCTTCTT CTACTGGCCC GCCGGTCAGG CCCTCTGGCA GTCGCTGCTG CGCGAGGACG CCTTCGGGCT GAAGTCCACC TTCGTGGGCC TTGCCAACTT TCGCCGCGTC CTGTCCGATC CGGCCTGGCT CAACTCGATC CAGGTGACGG CGGTCTTTTC CATTCTGACC GCCTTCTTCT CGATGGCGAT CGCGCTTCTG CTGGCCGTCC AGGCCGAGAA GGTGGTGCGC GGCCGCGGCT TCTACCGCAC GCTGATGATC TGGCCCTATG CGGTGGCGCC CGCCATCGCG GGGATGCTCT GGCTTTTCAT GTTCAACCCG TCCTTCGGCA CGCTCGCCTG GCCGCTGCGG CAGCTCGGCA TCCGCTGGGA TCCGCTGCTC GACGGCAACC AGGCCATGGC CCTCGTCGTC GCCGCCGCAA GCTGGAAGCA GATCAGCTAC AATTTCCTAT TCTTTGTCGC GGGCTTGCAA GCCATTCCTC GATCTCTGCT CGAAGCCGCG GCCATCGACG GGGCCAGCGC CCGGCGGAGG TTCTGGACCA TCACCTTCCC GCTTCTTGCG CCCACGACCT TCTTCCTGCT GGTCGTCAAC TCGGTCTATG CGCTCTTTGA CACGTTCGGC ATCATCCATG CGGTCACGGG CGGAGGCCCC GGCAAGTCCA CCGAGACGCT CGTCTACAAG GTCTATAACG ATGGCTTCGT GAACCTCCGG TTCGGAGATT CCGCGGCGCA GTCGGTCGTT CTCATGGTGA TCGTGATCGC GCTGACCGCC TTCCAGTTCA AATACATCGA GCGGAAAGTT CACTATGGCT GA
|
Protein sequence | MHRSTFPHRV LPWLLILPQL LISAVFFYWP AGQALWQSLL REDAFGLKST FVGLANFRRV LSDPAWLNSI QVTAVFSILT AFFSMAIALL LAVQAEKVVR GRGFYRTLMI WPYAVAPAIA GMLWLFMFNP SFGTLAWPLR QLGIRWDPLL DGNQAMALVV AAASWKQISY NFLFFVAGLQ AIPRSLLEAA AIDGASARRR FWTITFPLLA PTTFFLLVVN SVYALFDTFG IIHAVTGGGP GKSTETLVYK VYNDGFVNLR FGDSAAQSVV LMVIVIALTA FQFKYIERKV HYG
|
| |