Gene Pmob_0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_0288 
Symbol 
ID5758529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp305935 
End bp306807 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content33% 
IMG OID641301488 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001567353 
Protein GI160901772 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00066862 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTGGG GAAAATACAC ACCTTATCTT TTGCTTGCAC CTACACTAAT AATTATTGCC 
CTTTTTATAT ATTGGCCAGC AATTAACTCC TTTCTAATGA GTTTTTACAA AATATCACCT
TTTGGCGATA AGAGGATATT TGCTGGTGTT GACAACTACA TTAAGCTTTT TGAAAATGAG
GCATATTGGG AAGCTTTAAA GGTTACATTT ATATATATAG TTACAACGGT AATAATAGTC
GTTATTTTAG GTTACTTTAT TGCACAATTA CTAGATAATA AGGTCTTTGG GGTAAAAATT
TATAGAACTT TAATTTTTGT TCCTTATGTT ATTTCCTTTA CAATCGGGGG AGCATTGTGG
ACCTTTATGT TGAACCCAGT AGCAGGGCAT GTTAATTATT TTTTGTCACA AATCATTGGG
AAAAATATTA ATTGGTTAAA TCAAGTGCCA TATGCCTTAA TTTCAATTAT AGTTTCCAGT
GTTTGGAAGA TGCTGCCTTT TTCGATTATA TTCTATCTTG CGGGGTTACA GTCTATATCG
GAAACAATAA TAGAGAGTTC TGTTATTGAT GGAGCGAACA TGTGGCAAAG GATGTGGAAA
ATAAAATTTC CTATGCTTTC TCCCATTACA TTTTACTTAG TTATCATGAA TATTACCAAT
GGAATGTTTA AGTCGTTTGG AATCATTGAC ATTATGACCA GAGGAGGCCC TTTAGGAAGC
ACCACAACCT TAATTTACAA ACTATATCAA GACGCGTTCT TTTTCCAAAA GACAAGTTTA
GCAGCTGCAG AAAGTGTTGT TCTATTTATT ATTATGTCAT TTATCACCTT TCTTTATTTC
AGATTTGGTG AGAAAAGGGT TCATTATCAA TGA
 
Protein sequence
MKWGKYTPYL LLAPTLIIIA LFIYWPAINS FLMSFYKISP FGDKRIFAGV DNYIKLFENE 
AYWEALKVTF IYIVTTVIIV VILGYFIAQL LDNKVFGVKI YRTLIFVPYV ISFTIGGALW
TFMLNPVAGH VNYFLSQIIG KNINWLNQVP YALISIIVSS VWKMLPFSII FYLAGLQSIS
ETIIESSVID GANMWQRMWK IKFPMLSPIT FYLVIMNITN GMFKSFGIID IMTRGGPLGS
TTTLIYKLYQ DAFFFQKTSL AAAESVVLFI IMSFITFLYF RFGEKRVHYQ