More than 300 homologs were found in PanDaTox collection
for query gene Rcas_0115 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009767  Rcas_0115  binding-protein-dependent transport systems inner membrane component  100 
 
 
303 aa  600  1.0000000000000001e-171  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.013229  normal 
 
 
-
 
NC_009523  RoseRS_4568  binding-protein-dependent transport systems inner membrane component  81.06 
 
 
352 aa  500  1e-140  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  63.1 
 
 
306 aa  349  3e-95  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  53.85 
 
 
306 aa  314  9.999999999999999e-85  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0295  binding-protein-dependent transport systems inner membrane component  43.89 
 
 
306 aa  260  2e-68  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0472746 
 
 
-
 
NC_012669  Bcav_1506  binding-protein-dependent transport systems inner membrane component  48.76 
 
 
319 aa  246  3e-64  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.172357  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  44.72 
 
 
307 aa  242  5e-63  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014158  Tpau_3529  binding-protein-dependent transport systems inner membrane component  45.05 
 
 
311 aa  242  5e-63  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  44.72 
 
 
307 aa  242  5e-63  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_012669  Bcav_0896  binding-protein-dependent transport systems inner membrane component  47.65 
 
 
314 aa  241  1e-62  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17142  normal  0.200389 
 
 
-
 
NC_011886  Achl_2661  binding-protein-dependent transport systems inner membrane component  45.33 
 
 
320 aa  238  6.999999999999999e-62  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013521  Sked_18860  carbohydrate ABC transporter membrane protein  45.3 
 
 
316 aa  238  1e-61  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.346815 
 
 
-
 
NC_012669  Bcav_1529  binding-protein-dependent transport systems inner membrane component  40.91 
 
 
318 aa  237  2e-61  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.165529  normal  0.149292 
 
 
-
 
NC_008541  Arth_2946  binding-protein-dependent transport systems inner membrane component  45.45 
 
 
316 aa  235  7e-61  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12850  sn-glycerol-3-phosphate transport integral membrane protein ABC transporter ugpA  42.81 
 
 
303 aa  227  2e-58  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00000000170243  normal 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  44.44 
 
 
305 aa  227  2e-58  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013174  Jden_2242  binding-protein-dependent transport systems inner membrane component  48.51 
 
 
311 aa  226  3e-58  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.556058 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  40.07 
 
 
306 aa  221  9e-57  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_013172  Bfae_29890  carbohydrate ABC transporter membrane protein  41.46 
 
 
333 aa  215  7e-55  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  41.11 
 
 
313 aa  211  1e-53  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  37.93 
 
 
299 aa  209  3e-53  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  38.44 
 
 
310 aa  208  7e-53  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  38.44 
 
 
310 aa  208  8e-53  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0536  glycerol-3-phosphate ABC transporter permease  39.01 
 
 
310 aa  206  4e-52  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  37.71 
 
 
310 aa  206  4e-52  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_0567  glycerol-3-phosphate ABC transporter permease protein  39.01 
 
 
310 aa  206  4e-52  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  38.3 
 
 
310 aa  206  4e-52  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  39.01 
 
 
310 aa  206  5e-52  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  37.71 
 
 
310 aa  206  5e-52  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0623  putative glycerol-3-phosphate ABC transporter, permease protein  39.01 
 
 
310 aa  206  5e-52  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_30860  permease component of ABC-type sugar transporter  39.86 
 
 
350 aa  205  6e-52  Brachybacterium faecium DSM 4810  Bacteria  normal  0.99166  n/a   
 
 
-
 
NC_005957  BT9727_0478  glycerol-3-phosphate ABC transporter, permease  39.01 
 
 
310 aa  204  1e-51  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  39.06 
 
 
316 aa  202  4e-51  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  38.72 
 
 
315 aa  202  5e-51  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_013172  Bfae_28370  carbohydrate ABC transporter membrane protein  39.02 
 
 
287 aa  202  8e-51  Brachybacterium faecium DSM 4810  Bacteria  normal  0.096742  n/a   
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  37.76 
 
 
308 aa  200  1.9999999999999998e-50  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  40.61 
 
 
318 aa  197  1.0000000000000001e-49  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  40.7 
 
 
320 aa  198  1.0000000000000001e-49  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  39.44 
 
 
319 aa  197  2.0000000000000003e-49  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  39.93 
 
 
318 aa  197  3e-49  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  41.03 
 
 
294 aa  196  5.000000000000001e-49  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  38.44 
 
 
314 aa  196  5.000000000000001e-49  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  40 
 
 
305 aa  195  8.000000000000001e-49  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  36.77 
 
 
309 aa  194  2e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  34.09 
 
 
308 aa  191  1e-47  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  38.52 
 
 
305 aa  191  1e-47  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_012669  Bcav_2847  binding-protein-dependent transport systems inner membrane component  35.88 
 
 
305 aa  190  2e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.661532 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  37.11 
 
 
292 aa  190  2e-47  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  40.07 
 
 
316 aa  190  2e-47  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_4750  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
299 aa  189  4e-47  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.62916  normal  0.701692 
 
 
-
 
NC_010001  Cphy_0290  binding-protein-dependent transport systems inner membrane component  37.15 
 
 
297 aa  189  5.999999999999999e-47  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0563  binding-protein dependent transport system inner membrane protein  39.25 
 
 
294 aa  189  7e-47  Anabaena variabilis ATCC 29413  Bacteria  normal  0.22835  normal  0.0558608 
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  38.35 
 
 
300 aa  188  9e-47  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  38.04 
 
 
312 aa  188  1e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_011884  Cyan7425_0944  binding-protein-dependent transport systems inner membrane component  40.51 
 
 
290 aa  187  1e-46  Cyanothece sp. PCC 7425  Bacteria  normal  0.120711  normal  0.307929 
 
 
-
 
NC_011368  Rleg2_4663  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
299 aa  187  2e-46  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.456499 
 
 
-
 
NC_012669  Bcav_1523  binding-protein-dependent transport systems inner membrane component  43.21 
 
 
321 aa  187  2e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2847  binding-protein-dependent transport systems inner membrane component  36.05 
 
 
318 aa  186  3e-46  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  40.07 
 
 
353 aa  186  3e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_011071  Smal_2682  binding-protein-dependent transport systems inner membrane component  39.58 
 
 
293 aa  186  6e-46  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.990678  normal 
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  40.21 
 
 
309 aa  185  9e-46  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  35.86 
 
 
295 aa  185  1.0000000000000001e-45  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  37.63 
 
 
321 aa  183  2.0000000000000003e-45  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_010001  Cphy_0527  binding-protein-dependent transport systems inner membrane component  36.94 
 
 
296 aa  184  2.0000000000000003e-45  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000283647  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  38.51 
 
 
309 aa  184  2.0000000000000003e-45  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013721  HMPREF0424_1290  ABC transporter, permease protein  37.83 
 
 
311 aa  182  4.0000000000000006e-45  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  38.33 
 
 
309 aa  182  4.0000000000000006e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  43.28 
 
 
317 aa  182  5.0000000000000004e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  35.35 
 
 
310 aa  182  5.0000000000000004e-45  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  36.88 
 
 
314 aa  182  6e-45  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  36.88 
 
 
314 aa  182  6e-45  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  38.69 
 
 
316 aa  182  6e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2737  binding-protein-dependent transport systems inner membrane component  36.79 
 
 
292 aa  179  4e-44  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.161235  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  38.98 
 
 
291 aa  179  4e-44  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  33.89 
 
 
315 aa  178  8e-44  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00881  ABC transporter sugar permease  38.89 
 
 
294 aa  178  1e-43  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0244413  n/a   
 
 
-
 
NC_011899  Hore_20510  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
290 aa  176  3e-43  Halothermothrix orenii H 168  Bacteria  normal  0.0790749  n/a   
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
294 aa  176  4e-43  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2801  binding-protein-dependent transport systems inner membrane component  36.82 
 
 
288 aa  176  5e-43  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.254018  n/a   
 
 
-
 
NC_010483  TRQ2_0339  binding-protein-dependent transport systems inner membrane component  41.03 
 
 
420 aa  176  5e-43  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0321  binding-protein-dependent transport systems inner membrane component  41.03 
 
 
420 aa  175  7e-43  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  37.3 
 
 
310 aa  175  7e-43  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  34.98 
 
 
300 aa  174  9.999999999999999e-43  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  37.15 
 
 
293 aa  174  9.999999999999999e-43  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_1127  binding-protein-dependent transport systems inner membrane component  35.81 
 
 
328 aa  174  9.999999999999999e-43  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.190953  hitchhiker  0.00155627 
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  36.48 
 
 
296 aa  174  9.999999999999999e-43  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  37.24 
 
 
308 aa  175  9.999999999999999e-43  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  41.06 
 
 
287 aa  174  1.9999999999999998e-42  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA1182  sugar ABC transporter, permease protein, putative  37.3 
 
 
319 aa  174  1.9999999999999998e-42  Brucella suis 1330  Bacteria  normal  0.547049  n/a   
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  38.83 
 
 
310 aa  174  1.9999999999999998e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A1085  putative sugar ABC transporter, permease protein  37.3 
 
 
319 aa  174  1.9999999999999998e-42  Brucella ovis ATCC 25840  Bacteria  normal  0.589946  n/a   
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  39.46 
 
 
316 aa  173  1.9999999999999998e-42  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_013172  Bfae_29020  carbohydrate ABC transporter membrane protein  37.73 
 
 
275 aa  173  2.9999999999999996e-42  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  36.1 
 
 
299 aa  172  3.9999999999999995e-42  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_013526  Tter_2615  binding-protein-dependent transport systems inner membrane component  38.04 
 
 
307 aa  173  3.9999999999999995e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000296099  n/a   
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  36.59 
 
 
316 aa  173  3.9999999999999995e-42  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  35.86 
 
 
317 aa  173  3.9999999999999995e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3149  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
315 aa  172  5e-42  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0566553  normal  0.330059 
 
 
-
 
NC_014165  Tbis_3250  binding-protein-dependent transporter inner membrane component  38.65 
 
 
310 aa  172  5e-42  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  35.14 
 
 
300 aa  172  5e-42  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
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