| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2094 |
|---|
| Symbol | |
|---|
| ID | 4627016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 2549830 |
|---|
| End bp | 2550711 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639797239 |
|---|
| Product | sn-glycerol-3-phosphate transport system, binding protein inner membrane component |
|---|
| Protein accession | YP_943441 |
|---|
| Protein GI | 119945761 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.236232 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.396031 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCGC AAGCTGTATT TAAAAATAAA TGGTTGCCCA TTGCTCTTAT CACCCCGCAG
CTATTGATTA CTGCGGTATT TTTTCTGTGG CCTGCTGGTC AAGCCATTTT CCAGTCATTT
CAACTAGAGG ACCCCTTTGG GTTGAGCAGT GAATTTGTTG GCCTGGAAAA TTTTATCCAC
TTGTACAACG ACAGTAATTA TCTTGATTCT TTATTCACCA CGCTGCAATT TAGTATCAGT
GTCGCCTTTC TTGCCATGAT CAGTGCCTTG ATATTATCGG CCTTTGCCGA ACATATCGTG
CGTGGCTCCT TGTTTTACCG TACCTTTCTT ATTTGGCCCT ATGCCGTTGC CCCCCTTGTG
GCAGGATCGC TCTGGCTGTT TTTATTTGAT CCCACCATCG GCGTTATTGC AGAACTATTA
CAATGGTTCG GGATTAACTG GAATCCGACA CTCAACGATG CACACGCTAT GTGGATGGTG
ATTATTACAT CAACCTGGAA ACAAATTAGT TATAACTTTT TATTTTTCCT TGCCGCATTA
CAATCTGTCC CCAAATCGCT GCATGAAGCG GCGGCCATTG ATGGCAGTGG CCCGGTAAAA
CGCTTTATCA CCATCAGCTT TCCATTGATC TCACCCACCA GCTTTTTCTT ATTAGTGATT
AATTTCGTCT ATGCGTTTTT CGATACCTTT GGGATTATTC ACGCAATGAC CCAAGGAGGA
CCCGGCAGAA GTACCTCGAC GCTAGTATAC AAAGTTTATA ACGATGGGTT TATTGGGCTG
AATCTGGGCT CCTCAGCAGC TCAATCGGTC ATTTTAATGA TAATGGTGGC GCTCTTAACC
GTATTCCAAT TTAAATACAT AGAAAAAAAG GTAGCCTACT AA
|
|---|
| Protein sequence | MSSQAVFKNK WLPIALITPQ LLITAVFFLW PAGQAIFQSF QLEDPFGLSS EFVGLENFIH
LYNDSNYLDS LFTTLQFSIS VAFLAMISAL ILSAFAEHIV RGSLFYRTFL IWPYAVAPLV
AGSLWLFLFD PTIGVIAELL QWFGINWNPT LNDAHAMWMV IITSTWKQIS YNFLFFLAAL
QSVPKSLHEA AAIDGSGPVK RFITISFPLI SPTSFFLLVI NFVYAFFDTF GIIHAMTQGG
PGRSTSTLVY KVYNDGFIGL NLGSSAAQSV ILMIMVALLT VFQFKYIEKK VAY
|
|---|
| |