More than 300 homologs were found in PanDaTox collection
for query gene Bfae_28370 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_28370  carbohydrate ABC transporter membrane protein  100 
 
 
287 aa  559  1e-158  Brachybacterium faecium DSM 4810  Bacteria  normal  0.096742  n/a   
 
 
-
 
NC_012669  Bcav_0146  binding-protein-dependent transport systems inner membrane component  55.14 
 
 
292 aa  318  7.999999999999999e-86  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0896196  normal 
 
 
-
 
NC_009565  TBFG_12339  sugar-transport integral membrane protein ABC transporter uspA  51.41 
 
 
290 aa  291  1e-77  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  40.48 
 
 
308 aa  213  3.9999999999999995e-54  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0796  binding-protein-dependent transport systems inner membrane component  43.79 
 
 
312 aa  203  2e-51  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.633875  n/a   
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  42.7 
 
 
307 aa  201  9.999999999999999e-51  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  42.7 
 
 
307 aa  201  9.999999999999999e-51  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  36.55 
 
 
309 aa  198  7.999999999999999e-50  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  37.37 
 
 
292 aa  187  1e-46  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  37.1 
 
 
309 aa  187  1e-46  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
299 aa  185  6e-46  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  37.85 
 
 
306 aa  184  2.0000000000000003e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  38.97 
 
 
306 aa  182  6e-45  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  40.07 
 
 
305 aa  182  7e-45  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  34.75 
 
 
315 aa  180  2.9999999999999997e-44  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4568  binding-protein-dependent transport systems inner membrane component  35.39 
 
 
352 aa  179  2.9999999999999997e-44  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_4021  binding-protein-dependent transport systems inner membrane component  38.16 
 
 
293 aa  179  5.999999999999999e-44  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3289  ABC glycerol-3-phosphate transporter, inner membrane subunit UgpA  38.16 
 
 
293 aa  178  1e-43  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  37.14 
 
 
318 aa  177  1e-43  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_009429  Rsph17025_3284  maltose-binding periplasmic protein  37.81 
 
 
293 aa  177  1e-43  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0588261  normal 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  38.01 
 
 
306 aa  177  1e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_013521  Sked_15070  permease component of ABC-type sugar transporter  37.98 
 
 
311 aa  176  5e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0771026  normal 
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  36.07 
 
 
318 aa  175  7e-43  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  34.43 
 
 
300 aa  175  7e-43  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  35.21 
 
 
294 aa  174  9.999999999999999e-43  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2055  binding-protein-dependent transport systems inner membrane component  37.79 
 
 
415 aa  174  1.9999999999999998e-42  Meiothermus silvanus DSM 9946  Bacteria  normal  0.33288  normal  0.443347 
 
 
-
 
NC_010524  Lcho_3242  binding-protein-dependent transport systems inner membrane component  36.4 
 
 
317 aa  174  1.9999999999999998e-42  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  35.38 
 
 
296 aa  173  1.9999999999999998e-42  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20510  binding-protein-dependent transport systems inner membrane component  35.9 
 
 
290 aa  173  2.9999999999999996e-42  Halothermothrix orenii H 168  Bacteria  normal  0.0790749  n/a   
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  33.86 
 
 
314 aa  173  3.9999999999999995e-42  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  33.86 
 
 
314 aa  173  3.9999999999999995e-42  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_1290  ABC transporter, permease protein  34.87 
 
 
311 aa  172  5e-42  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_05100  permease component of ABC-type sugar transporter  36.5 
 
 
316 aa  172  7.999999999999999e-42  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0527  binding-protein-dependent transport systems inner membrane component  35.15 
 
 
296 aa  172  7.999999999999999e-42  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000283647  n/a   
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  32.85 
 
 
320 aa  171  1e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  36.07 
 
 
320 aa  171  1e-41  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  33.56 
 
 
294 aa  171  2e-41  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  35.69 
 
 
310 aa  170  2e-41  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2682  binding-protein-dependent transport systems inner membrane component  37.46 
 
 
293 aa  170  3e-41  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.990678  normal 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  31.14 
 
 
305 aa  169  4e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0295  binding-protein-dependent transport systems inner membrane component  37.01 
 
 
306 aa  169  5e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0472746 
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  30.93 
 
 
295 aa  169  5e-41  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_009767  Rcas_0115  binding-protein-dependent transport systems inner membrane component  38.52 
 
 
303 aa  169  5e-41  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.013229  normal 
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  35.66 
 
 
309 aa  169  6e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  34.78 
 
 
308 aa  169  7e-41  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_4189  binding-protein-dependent transport systems inner membrane component  36.14 
 
 
293 aa  169  7e-41  Paracoccus denitrificans PD1222  Bacteria  normal  0.689523  normal  0.199959 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  34.6 
 
 
316 aa  169  7e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS0536  glycerol-3-phosphate ABC transporter permease  35.34 
 
 
310 aa  167  1e-40  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0567  glycerol-3-phosphate ABC transporter permease protein  35.34 
 
 
310 aa  167  1e-40  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  35.69 
 
 
310 aa  168  1e-40  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8235  ABC transporter, permease protein  35.42 
 
 
306 aa  167  1e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  34.98 
 
 
310 aa  167  2e-40  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  35.34 
 
 
310 aa  167  2e-40  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0623  putative glycerol-3-phosphate ABC transporter, permease protein  35.34 
 
 
310 aa  167  2e-40  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  35.69 
 
 
310 aa  167  2e-40  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  34.98 
 
 
310 aa  167  2e-40  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2532  binding-protein-dependent transport systems inner membrane component  36.81 
 
 
417 aa  166  2.9999999999999998e-40  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.636087 
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  36.65 
 
 
293 aa  167  2.9999999999999998e-40  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
300 aa  166  4e-40  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014151  Cfla_1127  binding-protein-dependent transport systems inner membrane component  37.37 
 
 
328 aa  166  4e-40  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.190953  hitchhiker  0.00155627 
 
 
-
 
NC_013521  Sked_18860  carbohydrate ABC transporter membrane protein  37.41 
 
 
316 aa  166  4e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.346815 
 
 
-
 
NC_005957  BT9727_0478  glycerol-3-phosphate ABC transporter, permease  34.98 
 
 
310 aa  166  5e-40  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  36.1 
 
 
316 aa  165  8e-40  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  37.06 
 
 
305 aa  165  9e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_013525  Tter_0428  binding-protein-dependent transport systems inner membrane component  35.07 
 
 
310 aa  164  1.0000000000000001e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_0914  binding-protein-dependent transport systems inner membrane component  33.1 
 
 
310 aa  164  2.0000000000000002e-39  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  36.3 
 
 
293 aa  164  2.0000000000000002e-39  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_1752  binding-protein-dependent transport systems inner membrane component  36.56 
 
 
314 aa  164  2.0000000000000002e-39  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000089983 
 
 
-
 
NC_011729  PCC7424_1896  binding-protein-dependent transport systems inner membrane component  35.61 
 
 
296 aa  164  2.0000000000000002e-39  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.0543799999999999e-20 
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  36.16 
 
 
321 aa  164  2.0000000000000002e-39  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1523  binding-protein-dependent transport systems inner membrane component  37.87 
 
 
321 aa  164  2.0000000000000002e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_0856  binding-protein-dependent transport systems inner membrane component  33.8 
 
 
293 aa  163  3e-39  Polaromonas sp. JS666  Bacteria  normal  normal  0.565462 
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  32.52 
 
 
321 aa  163  3e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1637  binding-protein-dependent transport systems inner membrane component  34.89 
 
 
303 aa  163  3e-39  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0695484  n/a   
 
 
-
 
NC_013172  Bfae_29020  carbohydrate ABC transporter membrane protein  35.09 
 
 
275 aa  163  4.0000000000000004e-39  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1286  binding-protein-dependent transport systems inner membrane component  34.62 
 
 
293 aa  162  4.0000000000000004e-39  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3122  binding-protein-dependent transport systems inner membrane component  35.61 
 
 
305 aa  162  5.0000000000000005e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.99861  hitchhiker  0.000381845 
 
 
-
 
NC_014212  Mesil_0957  binding-protein-dependent transport systems inner membrane component  37.59 
 
 
302 aa  162  5.0000000000000005e-39  Meiothermus silvanus DSM 9946  Bacteria  normal  0.644081  normal  0.138738 
 
 
-
 
NC_012669  Bcav_1699  binding-protein-dependent transport systems inner membrane component  37.13 
 
 
315 aa  161  1e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.258357  normal 
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  32.74 
 
 
288 aa  161  1e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_013595  Sros_3537  ABC transporter membrane spanning protein (galacturonic acid)  35.84 
 
 
322 aa  161  1e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601194  normal 
 
 
-
 
NC_013595  Sros_4987  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
292 aa  161  1e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.753078  normal 
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  35.46 
 
 
291 aa  160  2e-38  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_013131  Caci_3807  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
316 aa  160  2e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.922708  normal  0.915782 
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  34.64 
 
 
310 aa  160  2e-38  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0062  binding-protein-dependent transport systems inner membrane component  36.94 
 
 
285 aa  160  2e-38  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0290  binding-protein-dependent transport systems inner membrane component  34.41 
 
 
297 aa  160  2e-38  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2506  binding-protein-dependent transport systems inner membrane component  38.4 
 
 
306 aa  160  3e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000185658  n/a   
 
 
-
 
NC_011831  Cagg_2266  binding-protein-dependent transport systems inner membrane component  37.59 
 
 
296 aa  160  3e-38  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.0000392628 
 
 
-
 
NC_012917  PC1_1907  binding-protein-dependent transport systems inner membrane component  36.17 
 
 
296 aa  160  3e-38  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0961638  n/a   
 
 
-
 
NC_011886  Achl_3074  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
314 aa  160  3e-38  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_0461  binding-protein dependent transport system inner membrane protein  34.28 
 
 
301 aa  159  4e-38  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0667876 
 
 
-
 
NC_010001  Cphy_1530  binding-protein-dependent transport systems inner membrane component  32.77 
 
 
295 aa  159  4e-38  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1656  binding-protein-dependent transport systems inner membrane component  32.88 
 
 
318 aa  159  5e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.152531  normal  0.26367 
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  34.29 
 
 
313 aa  159  5e-38  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_004311  BRA0656  glycerol-3-phosphate ABC transporter, permease protein  33.92 
 
 
293 aa  159  7e-38  Brucella suis 1330  Bacteria  normal  0.552753  n/a   
 
 
-
 
NC_013172  Bfae_30860  permease component of ABC-type sugar transporter  33.33 
 
 
350 aa  159  7e-38  Brachybacterium faecium DSM 4810  Bacteria  normal  0.99166  n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
309 aa  159  7e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_009504  BOV_A0618  glycerol-3-phosphate ABC transporter, permease protein  33.92 
 
 
293 aa  159  7e-38  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  33.09 
 
 
311 aa  159  7e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
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