More than 300 homologs were found in PanDaTox collection
for query gene Bfae_29890 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_29890  carbohydrate ABC transporter membrane protein  100 
 
 
333 aa  659    Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2946  binding-protein-dependent transport systems inner membrane component  69.77 
 
 
316 aa  414  9.999999999999999e-116  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2661  binding-protein-dependent transport systems inner membrane component  71.93 
 
 
320 aa  389  1e-107  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009664  Krad_0295  binding-protein-dependent transport systems inner membrane component  51.76 
 
 
306 aa  288  9e-77  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0472746 
 
 
-
 
NC_013521  Sked_18860  carbohydrate ABC transporter membrane protein  52.46 
 
 
316 aa  276  5e-73  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.346815 
 
 
-
 
NC_012669  Bcav_0896  binding-protein-dependent transport systems inner membrane component  51.61 
 
 
314 aa  264  2e-69  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17142  normal  0.200389 
 
 
-
 
NC_014158  Tpau_3529  binding-protein-dependent transport systems inner membrane component  44.44 
 
 
311 aa  257  2e-67  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2242  binding-protein-dependent transport systems inner membrane component  49.35 
 
 
311 aa  244  1.9999999999999999e-63  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.556058 
 
 
-
 
NC_009565  TBFG_12850  sn-glycerol-3-phosphate transport integral membrane protein ABC transporter ugpA  44.11 
 
 
303 aa  241  1e-62  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00000000170243  normal 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  43.18 
 
 
306 aa  228  1e-58  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  43.42 
 
 
306 aa  226  4e-58  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_009523  RoseRS_4568  binding-protein-dependent transport systems inner membrane component  40.81 
 
 
352 aa  224  1e-57  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1529  binding-protein-dependent transport systems inner membrane component  39.66 
 
 
318 aa  201  1.9999999999999998e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.165529  normal  0.149292 
 
 
-
 
NC_009767  Rcas_0115  binding-protein-dependent transport systems inner membrane component  41.33 
 
 
303 aa  200  3e-50  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.013229  normal 
 
 
-
 
NC_012669  Bcav_1506  binding-protein-dependent transport systems inner membrane component  42.25 
 
 
319 aa  195  8.000000000000001e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.172357  normal 
 
 
-
 
NC_013172  Bfae_30860  permease component of ABC-type sugar transporter  40.07 
 
 
350 aa  193  4e-48  Brachybacterium faecium DSM 4810  Bacteria  normal  0.99166  n/a   
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  36.74 
 
 
316 aa  184  2.0000000000000003e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  37.63 
 
 
318 aa  182  6e-45  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  36.95 
 
 
318 aa  182  8.000000000000001e-45  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_009050  Rsph17029_4021  binding-protein-dependent transport systems inner membrane component  36.27 
 
 
293 aa  176  5e-43  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  35.5 
 
 
320 aa  175  9.999999999999999e-43  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3289  ABC glycerol-3-phosphate transporter, inner membrane subunit UgpA  35.92 
 
 
293 aa  174  1.9999999999999998e-42  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  38.57 
 
 
292 aa  174  1.9999999999999998e-42  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_009429  Rsph17025_3284  maltose-binding periplasmic protein  35.94 
 
 
293 aa  173  2.9999999999999996e-42  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0588261  normal 
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  35.14 
 
 
294 aa  171  2e-41  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_012669  Bcav_0146  binding-protein-dependent transport systems inner membrane component  35.14 
 
 
292 aa  169  7e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0896196  normal 
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  35.76 
 
 
309 aa  169  8e-41  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  36.16 
 
 
307 aa  167  2e-40  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  36.16 
 
 
307 aa  167  2e-40  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  32.19 
 
 
299 aa  166  5e-40  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  35.07 
 
 
312 aa  165  9e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  33.87 
 
 
309 aa  164  1.0000000000000001e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
313 aa  164  3e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4587  binding-protein-dependent transport systems inner membrane component  36.96 
 
 
325 aa  163  3e-39  Burkholderia phytofirmans PsJN  Bacteria  normal  0.351015  normal 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  34.77 
 
 
305 aa  161  1e-38  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  31.29 
 
 
310 aa  161  1e-38  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  31.29 
 
 
310 aa  160  2e-38  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  32 
 
 
310 aa  160  2e-38  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  33.9 
 
 
316 aa  160  3e-38  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  34.08 
 
 
313 aa  160  3e-38  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_005945  BAS0536  glycerol-3-phosphate ABC transporter permease  31.67 
 
 
310 aa  160  4e-38  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0567  glycerol-3-phosphate ABC transporter permease protein  31.67 
 
 
310 aa  160  4e-38  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_28370  carbohydrate ABC transporter membrane protein  35.05 
 
 
287 aa  160  4e-38  Brachybacterium faecium DSM 4810  Bacteria  normal  0.096742  n/a   
 
 
-
 
NC_011773  BCAH820_0623  putative glycerol-3-phosphate ABC transporter, permease protein  31.67 
 
 
310 aa  159  5e-38  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  31.67 
 
 
310 aa  159  5e-38  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_4189  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
293 aa  159  5e-38  Paracoccus denitrificans PD1222  Bacteria  normal  0.689523  normal  0.199959 
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  31.48 
 
 
310 aa  159  5e-38  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0790  binding-protein-dependent transport systems inner membrane component  34.11 
 
 
293 aa  159  6e-38  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1695  binding-protein-dependent transport systems inner membrane component  32.74 
 
 
288 aa  159  6e-38  Thermotoga sp. RQ2  Bacteria  normal  0.967188  n/a   
 
 
-
 
NC_008782  Ajs_0861  binding-protein-dependent transport systems inner membrane component  34.11 
 
 
293 aa  159  7e-38  Acidovorax sp. JS42  Bacteria  normal  normal  0.533828 
 
 
-
 
NC_005957  BT9727_0478  glycerol-3-phosphate ABC transporter, permease  31.67 
 
 
310 aa  158  1e-37  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  34.63 
 
 
316 aa  158  1e-37  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  31.33 
 
 
310 aa  158  1e-37  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5659  binding-protein-dependent transport systems inner membrane component  35.14 
 
 
313 aa  157  2e-37  Burkholderia cenocepacia HI2424  Bacteria  normal  0.308138  normal  0.32687 
 
 
-
 
NC_010622  Bphy_2350  binding-protein-dependent transport systems inner membrane component  36.9 
 
 
317 aa  157  3e-37  Burkholderia phymatum STM815  Bacteria  normal  normal  0.143445 
 
 
-
 
NC_008061  Bcen_5200  binding-protein-dependent transport systems inner membrane component  34.94 
 
 
313 aa  156  4e-37  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2602  binding-protein-dependent transport systems inner membrane component  36.86 
 
 
306 aa  156  4e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0924232  normal 
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  31 
 
 
308 aa  156  6e-37  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_5488  binding-protein-dependent transport systems inner membrane component  34.41 
 
 
319 aa  155  8e-37  Burkholderia ambifaria MC40-6  Bacteria  normal  0.80176  hitchhiker  0.000205378 
 
 
-
 
NC_010515  Bcenmc03_4576  binding-protein-dependent transport systems inner membrane component  36.15 
 
 
314 aa  155  8e-37  Burkholderia cenocepacia MC0-3  Bacteria  normal  hitchhiker  0.00748515 
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  31.91 
 
 
308 aa  155  8e-37  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3651  binding-protein-dependent transport systems inner membrane component  32.12 
 
 
301 aa  155  9e-37  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0332234  normal 
 
 
-
 
NC_013947  Snas_3122  binding-protein-dependent transport systems inner membrane component  36.43 
 
 
305 aa  155  1e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.99861  hitchhiker  0.000381845 
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  34.33 
 
 
317 aa  154  2e-36  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_2833  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
319 aa  153  2.9999999999999998e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0200859  normal 
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  32 
 
 
308 aa  153  2.9999999999999998e-36  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  32.79 
 
 
318 aa  154  2.9999999999999998e-36  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  32.1 
 
 
315 aa  153  4e-36  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4933  binding-protein-dependent transport systems inner membrane component  34.74 
 
 
314 aa  153  4e-36  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.103484 
 
 
-
 
NC_010001  Cphy_0527  binding-protein-dependent transport systems inner membrane component  30.48 
 
 
296 aa  152  5.9999999999999996e-36  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000283647  n/a   
 
 
-
 
NC_010003  Pmob_0288  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
290 aa  152  1e-35  Petrotoga mobilis SJ95  Bacteria  hitchhiker  0.00066862  n/a   
 
 
-
 
NC_004311  BRA0656  glycerol-3-phosphate ABC transporter, permease protein  32.51 
 
 
293 aa  152  1e-35  Brucella suis 1330  Bacteria  normal  0.552753  n/a   
 
 
-
 
NC_009504  BOV_A0618  glycerol-3-phosphate ABC transporter, permease protein  32.51 
 
 
293 aa  152  1e-35  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  30.65 
 
 
320 aa  151  2e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  32.86 
 
 
300 aa  150  2e-35  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  32.57 
 
 
307 aa  150  2e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  33.02 
 
 
319 aa  151  2e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2718  binding-protein-dependent transport systems inner membrane component  36.67 
 
 
330 aa  150  3e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.21265 
 
 
-
 
NC_009664  Krad_0116  binding-protein-dependent transport systems inner membrane component  31.48 
 
 
317 aa  150  3e-35  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.156333  normal  0.563407 
 
 
-
 
NC_009667  Oant_0639  binding-protein-dependent transport systems inner membrane component  30.67 
 
 
305 aa  150  3e-35  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.371496  n/a   
 
 
-
 
NC_009668  Oant_2941  binding-protein-dependent transport systems inner membrane component  32.17 
 
 
320 aa  150  3e-35  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.974377  n/a   
 
 
-
 
NC_010002  Daci_5466  binding-protein-dependent transport systems inner membrane component  31.65 
 
 
293 aa  150  4e-35  Delftia acidovorans SPH-1  Bacteria  normal  0.0543502  normal 
 
 
-
 
NC_010682  Rpic_1093  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
293 aa  149  5e-35  Ralstonia pickettii 12J  Bacteria  normal  0.0106698  normal 
 
 
-
 
NC_010001  Cphy_0290  binding-protein-dependent transport systems inner membrane component  34.51 
 
 
297 aa  149  9e-35  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0259  binding-protein-dependent transport systems inner membrane component  31.99 
 
 
324 aa  148  1.0000000000000001e-34  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  30.84 
 
 
321 aa  148  1.0000000000000001e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1186  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
293 aa  148  1.0000000000000001e-34  Ralstonia pickettii 12D  Bacteria  normal  0.0963268  normal 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  30.92 
 
 
305 aa  148  1.0000000000000001e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3696  sn-glycerol-3-phosphate transport system permease protein ugpA  31.91 
 
 
322 aa  147  2.0000000000000003e-34  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3898  binding-protein-dependent transport systems inner membrane component  34.87 
 
 
324 aa  147  2.0000000000000003e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  32.86 
 
 
316 aa  147  2.0000000000000003e-34  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_003295  RSc1265  SN-glycerol-3-phosphate transmembrane ABC transporter protein  32.17 
 
 
293 aa  147  3e-34  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  31.82 
 
 
314 aa  147  3e-34  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  31.82 
 
 
314 aa  147  3e-34  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I3020  glycerol-3-phosphate ABC transporter, permease protein  31.29 
 
 
319 aa  147  3e-34  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  33.44 
 
 
322 aa  147  3e-34  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_013174  Jden_2071  binding-protein-dependent transport systems inner membrane component  32.93 
 
 
345 aa  147  3e-34  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.0000672298  normal 
 
 
-
 
NC_007434  BURPS1710b_3725  binding-protein-dependent transporter inner membrane protein  31.69 
 
 
322 aa  146  4.0000000000000006e-34  Burkholderia pseudomallei 1710b  Bacteria  normal  0.119738  n/a   
 
 
-
 
NC_007908  Rfer_1286  binding-protein-dependent transport systems inner membrane component  32.32 
 
 
293 aa  147  4.0000000000000006e-34  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_11550  carbohydrate ABC transporter membrane protein  33.45 
 
 
354 aa  147  4.0000000000000006e-34  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal  0.0144146 
 
 
-
 
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