More than 300 homologs were found in PanDaTox collection
for query gene TBFG_12850 on replicon NC_009565
Organism: Mycobacterium tuberculosis F11



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009565  TBFG_12850  sn-glycerol-3-phosphate transport integral membrane protein ABC transporter ugpA  100 
 
 
303 aa  600  1.0000000000000001e-171  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00000000170243  normal 
 
 
-
 
NC_014158  Tpau_3529  binding-protein-dependent transport systems inner membrane component  61.59 
 
 
311 aa  361  6e-99  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0295  binding-protein-dependent transport systems inner membrane component  51.18 
 
 
306 aa  286  2e-76  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0472746 
 
 
-
 
NC_013521  Sked_18860  carbohydrate ABC transporter membrane protein  52.13 
 
 
316 aa  273  3e-72  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.346815 
 
 
-
 
NC_012669  Bcav_0896  binding-protein-dependent transport systems inner membrane component  51.28 
 
 
314 aa  259  3e-68  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17142  normal  0.200389 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  48.41 
 
 
306 aa  249  3e-65  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2946  binding-protein-dependent transport systems inner membrane component  45.08 
 
 
316 aa  242  7e-63  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2242  binding-protein-dependent transport systems inner membrane component  49.63 
 
 
311 aa  239  4e-62  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.556058 
 
 
-
 
NC_011886  Achl_2661  binding-protein-dependent transport systems inner membrane component  43.46 
 
 
320 aa  236  4e-61  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_29890  carbohydrate ABC transporter membrane protein  44.88 
 
 
333 aa  235  6e-61  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1529  binding-protein-dependent transport systems inner membrane component  41 
 
 
318 aa  225  8e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.165529  normal  0.149292 
 
 
-
 
NC_012669  Bcav_1506  binding-protein-dependent transport systems inner membrane component  45.82 
 
 
319 aa  223  4e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.172357  normal 
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  43.05 
 
 
306 aa  221  9.999999999999999e-57  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_013172  Bfae_30860  permease component of ABC-type sugar transporter  43.01 
 
 
350 aa  209  3e-53  Brachybacterium faecium DSM 4810  Bacteria  normal  0.99166  n/a   
 
 
-
 
NC_009523  RoseRS_4568  binding-protein-dependent transport systems inner membrane component  41.35 
 
 
352 aa  208  9e-53  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  39.72 
 
 
307 aa  204  2e-51  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  39.72 
 
 
307 aa  204  2e-51  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_009767  Rcas_0115  binding-protein-dependent transport systems inner membrane component  43.84 
 
 
303 aa  200  3e-50  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.013229  normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  35.42 
 
 
299 aa  197  2.0000000000000003e-49  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  38.75 
 
 
292 aa  192  7e-48  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  36.45 
 
 
318 aa  189  5.999999999999999e-47  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  35.45 
 
 
318 aa  188  1e-46  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  38.59 
 
 
305 aa  187  3e-46  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  36.24 
 
 
320 aa  186  3e-46  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4587  binding-protein-dependent transport systems inner membrane component  36.21 
 
 
325 aa  181  1e-44  Burkholderia phytofirmans PsJN  Bacteria  normal  0.351015  normal 
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  37.23 
 
 
312 aa  179  5.999999999999999e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  36.52 
 
 
294 aa  176  4e-43  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_013739  Cwoe_4882  binding-protein-dependent transport systems inner membrane component  37.4 
 
 
313 aa  176  6e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.115668  normal 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  35.81 
 
 
316 aa  174  9.999999999999999e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_4750  binding-protein-dependent transport systems inner membrane component  35.21 
 
 
299 aa  173  2.9999999999999996e-42  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.62916  normal  0.701692 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  35.76 
 
 
306 aa  173  3.9999999999999995e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_009654  Mmwyl1_2009  binding-protein-dependent transport systems inner membrane component  32.66 
 
 
291 aa  173  3.9999999999999995e-42  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0527  binding-protein-dependent transport systems inner membrane component  36.92 
 
 
296 aa  172  5e-42  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000283647  n/a   
 
 
-
 
NC_011368  Rleg2_4663  binding-protein-dependent transport systems inner membrane component  33 
 
 
299 aa  169  4e-41  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.456499 
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  35.14 
 
 
320 aa  169  7e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_010622  Bphy_2350  binding-protein-dependent transport systems inner membrane component  34.44 
 
 
317 aa  168  8e-41  Burkholderia phymatum STM815  Bacteria  normal  normal  0.143445 
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  37.09 
 
 
309 aa  168  9e-41  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  35.57 
 
 
308 aa  168  1e-40  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  34.89 
 
 
319 aa  167  2e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_5488  binding-protein-dependent transport systems inner membrane component  35.55 
 
 
319 aa  167  2e-40  Burkholderia ambifaria MC40-6  Bacteria  normal  0.80176  hitchhiker  0.000205378 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  36.93 
 
 
316 aa  167  2e-40  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_4933  binding-protein-dependent transport systems inner membrane component  35.02 
 
 
314 aa  164  2.0000000000000002e-39  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.103484 
 
 
-
 
NC_008543  Bcen2424_5659  binding-protein-dependent transport systems inner membrane component  34.22 
 
 
313 aa  164  2.0000000000000002e-39  Burkholderia cenocepacia HI2424  Bacteria  normal  0.308138  normal  0.32687 
 
 
-
 
NC_013131  Caci_4696  binding-protein-dependent transport systems inner membrane component  37.88 
 
 
340 aa  164  2.0000000000000002e-39  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.00310659  normal 
 
 
-
 
NC_007778  RPB_0176  binding-protein dependent transport system inner membrane protein  36.23 
 
 
314 aa  162  5.0000000000000005e-39  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_5200  binding-protein-dependent transport systems inner membrane component  33.89 
 
 
313 aa  162  5.0000000000000005e-39  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_4576  binding-protein-dependent transport systems inner membrane component  34.22 
 
 
314 aa  162  5.0000000000000005e-39  Burkholderia cenocepacia MC0-3  Bacteria  normal  hitchhiker  0.00748515 
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  30.64 
 
 
308 aa  162  6e-39  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010557  BamMC406_6025  binding-protein-dependent transport systems inner membrane component  35.79 
 
 
305 aa  162  7e-39  Burkholderia ambifaria MC40-6  Bacteria  normal  0.584937  normal 
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
317 aa  162  8.000000000000001e-39  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008392  Bamb_6325  binding-protein-dependent transport systems inner membrane component  35.59 
 
 
305 aa  161  1e-38  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3149  binding-protein-dependent transport systems inner membrane component  35.51 
 
 
315 aa  160  2e-38  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0566553  normal  0.330059 
 
 
-
 
NC_010184  BcerKBAB4_2801  binding-protein-dependent transport systems inner membrane component  36.1 
 
 
288 aa  160  3e-38  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.254018  n/a   
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  34.45 
 
 
307 aa  160  3e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  31.77 
 
 
310 aa  159  7e-38  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0131  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
319 aa  159  7e-38  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.128042  n/a   
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  31.77 
 
 
310 aa  158  8e-38  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  30.56 
 
 
315 aa  158  8e-38  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  31.77 
 
 
310 aa  158  1e-37  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_3195  binding-protein-dependent transport systems inner membrane component  34.41 
 
 
312 aa  158  1e-37  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.142654 
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  32.08 
 
 
310 aa  158  1e-37  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  36.19 
 
 
321 aa  158  1e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0563  binding-protein dependent transport system inner membrane protein  37.23 
 
 
294 aa  157  2e-37  Anabaena variabilis ATCC 29413  Bacteria  normal  0.22835  normal  0.0558608 
 
 
-
 
NC_012850  Rleg_3429  binding-protein-dependent transport systems inner membrane component  34.26 
 
 
307 aa  157  2e-37  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4879  binding-protein-dependent transport systems inner membrane component  35.23 
 
 
305 aa  157  2e-37  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.825826  n/a   
 
 
-
 
NC_008543  Bcen2424_3286  binding-protein-dependent transport systems inner membrane component  35.23 
 
 
305 aa  157  2e-37  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0077  binding-protein-dependent transport systems inner membrane component  34.14 
 
 
311 aa  157  3e-37  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0536  glycerol-3-phosphate ABC transporter permease  31.44 
 
 
310 aa  157  3e-37  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  32.35 
 
 
317 aa  156  3e-37  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_007530  GBAA_0567  glycerol-3-phosphate ABC transporter permease protein  31.44 
 
 
310 aa  157  3e-37  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  37.37 
 
 
322 aa  156  4e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  31.44 
 
 
310 aa  156  4e-37  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  31.44 
 
 
310 aa  156  5.0000000000000005e-37  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0623  putative glycerol-3-phosphate ABC transporter, permease protein  31.44 
 
 
310 aa  156  5.0000000000000005e-37  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013739  Cwoe_3956  binding-protein-dependent transport systems inner membrane component  41.26 
 
 
309 aa  155  7e-37  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_0478  glycerol-3-phosphate ABC transporter, permease  31.44 
 
 
310 aa  155  8e-37  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0290  binding-protein-dependent transport systems inner membrane component  34.47 
 
 
297 aa  154  2e-36  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  34.32 
 
 
313 aa  154  2e-36  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  30.74 
 
 
314 aa  153  2.9999999999999998e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_013721  HMPREF0424_1315  ABC transporter, permease protein  33.11 
 
 
301 aa  153  2.9999999999999998e-36  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  35.99 
 
 
321 aa  153  2.9999999999999998e-36  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2010  ABC transporter substrate binding inner membrane protein  30.77 
 
 
318 aa  153  2.9999999999999998e-36  Psychromonas ingrahamii 37  Bacteria  normal  0.360583  normal 
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  32.64 
 
 
288 aa  154  2.9999999999999998e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_012669  Bcav_3676  binding-protein-dependent transport systems inner membrane component  38.87 
 
 
309 aa  152  5e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_0754  binding-protein-dependent transport systems inner membrane component  31.86 
 
 
324 aa  152  5e-36  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000000204062  n/a   
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  36.88 
 
 
317 aa  152  5e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  32.58 
 
 
311 aa  152  5e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  33.55 
 
 
318 aa  152  5.9999999999999996e-36  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  33.94 
 
 
300 aa  152  5.9999999999999996e-36  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2602  binding-protein-dependent transport systems inner membrane component  36.07 
 
 
306 aa  152  5.9999999999999996e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0924232  normal 
 
 
-
 
NC_012669  Bcav_2833  binding-protein-dependent transport systems inner membrane component  32.67 
 
 
319 aa  152  8e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0200859  normal 
 
 
-
 
NC_013131  Caci_4985  binding-protein-dependent transport systems inner membrane component  36.84 
 
 
313 aa  152  8.999999999999999e-36  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00226923  hitchhiker  0.00373728 
 
 
-
 
NC_007963  Csal_2737  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
292 aa  152  8.999999999999999e-36  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.161235  n/a   
 
 
-
 
NC_008010  Dgeo_2663  binding-protein-dependent transport systems inner membrane component  36.59 
 
 
316 aa  152  8.999999999999999e-36  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.141538  n/a   
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  31.99 
 
 
308 aa  151  1e-35  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2718  binding-protein-dependent transport systems inner membrane component  34.98 
 
 
330 aa  151  2e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.21265 
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  32.53 
 
 
313 aa  150  2e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  30.54 
 
 
310 aa  151  2e-35  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_1290  ABC transporter, permease protein  32.97 
 
 
311 aa  150  3e-35  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_1523  binding-protein-dependent transport systems inner membrane component  35.64 
 
 
321 aa  150  3e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
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