Gene Ping_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2010 
Symbol 
ID4627216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2445190 
End bp2446146 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content42% 
IMG OID639797171 
ProductABC transporter substrate binding inner membrane protein 
Protein accessionYP_943373 
Protein GI119945693 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.360583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATAA TTGTGCAAGT CTCGAAACTC GGAAAGGTGG AGTGTTCAGT GAAAACAACG 
TACCCAAAAA GCCGATTGCC TTCGGTTAGA AAAAAAAGGC GAATTAGTGC GAAATTATCT
CCATGGCTGT TTTTAGCCCC GGCAATGATA ATTTTTTCTG TTTATGTGTT ATATCCCATC
TTATCCAGTA TCTCGTTAAG CTTTTACAAC TGGGATGGTA TGGGAGAAAA AACCTGGGTC
GGTTTTGGCA ACTATGTTGA ACTATTTGAT TCGGACGCTT TTTATACCTC TTTGAAAAAT
AACTTATTAT GGTTAATTTT CTATATGCTT GCGCCGCCCC TTGGTCTGCT AATTGCACTT
TTCCTAAATC AACAAGTTAA GGGCATTCGG ATTGTAAAAT CCCTGTTTTT CTTTCCTTTT
GTTATCTCCC AAGTGGTGGT CGGTTTAGTG TTTGCATGGT TTTATGACCC TAGTTTTGGC
CTGTTTAATA TTGCCATAGG CGCATTGGGT TTTGAGCCAG TAGCCATTCT GGCGAACGAG
GATTATGTCA CTTTCGGGAT CATTGCTGCG GGTCTTTGGC CGCAGATAGC GTACTGCATG
ATTCTTTATA TGACCGGGCT TAATAATCTT GATGCAGAAC AATTAGAAGC CGCACGTTTA
GATGGCGCTA AAAGATTAAA AATGCTCTGG TATGTAGTGC TGCCCCAACT AAGACCCGCA
ACCTTTATTG CGATTGTGGT GACTATTATT GGTGCTTTAC GTTCATTTGA CCTTGTGGCA
ACGATGACTG CGGGCGGCCC ATGGGGTAGT TCGTCAGTGC TTGCCTATCA AATGTATGAA
GAATCTATCT TTAACTATCG CATGGGTTAC GGTGCTGCGG TATCCGTCGT GCTGTTCTTA
ATCATGGATG TTTATATCGC ATATTTCTTA TGGCGTATGC TAAGGAGAGA AAAATAA
 
Protein sequence
MMIIVQVSKL GKVECSVKTT YPKSRLPSVR KKRRISAKLS PWLFLAPAMI IFSVYVLYPI 
LSSISLSFYN WDGMGEKTWV GFGNYVELFD SDAFYTSLKN NLLWLIFYML APPLGLLIAL
FLNQQVKGIR IVKSLFFFPF VISQVVVGLV FAWFYDPSFG LFNIAIGALG FEPVAILANE
DYVTFGIIAA GLWPQIAYCM ILYMTGLNNL DAEQLEAARL DGAKRLKMLW YVVLPQLRPA
TFIAIVVTII GALRSFDLVA TMTAGGPWGS SSVLAYQMYE ESIFNYRMGY GAAVSVVLFL
IMDVYIAYFL WRMLRREK