| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4696 |
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| Symbol | |
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| ID | 8336050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5352396 |
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| End bp | 5353418 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644957796 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003115398 |
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| Protein GI | 256393834 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00310659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACG GAATCCTGAT CTCCGACCAT GAGAAGTCCG GGGCCGCGGG CCGGCGCCGG
AACGCGCGGA ACGCCCCGGT CGCAGAGGCC GGAGACGGAG CGGTCGGGGA CGCAGCGACA
GTTGCCAAAC CCAAGTGGAC CGCCCGCCGC CGCCGCGTCG TCGCCAACCT GACCGGCTGG
TCCTTCGCCG CCCCGGCGAC TCTGATCATC CTGGGCCTGA CGCTGTTCCC CGCCGCCTGG
GCGTTCCTGA TCTCCCGCGA GCACTGGAAC GGGATCACGC CGGCGCGCCA GATCGGCTGG
GACAACTACC GTCTGATGGC GCAGGACCCG GACTTCAGGT CCGCTGTGAA CCACACCGTG
CTGTTCACGG TCTTGTACGT CCCGGTGGTG CTGGTCCTGG GGATGTTCCT GGCGATCGCG
CTGAACCGCA AGATCCGCTT CATCGCCTTC TACCGCACCG CGCTGTTCGT GCCGCTGGTC
GTCTCGGCGG CGGCCACCGG CATCCTGGCG AACTTCGTCT TCGACCAGCA GTTCGGGCTG
GCGAACAACC TGCTGCGGGT GCTGCACCTG CCGCAGCAGG GGTTCCTGGC CAACCGGCAC
GAGGTCATGT GGGTCATAGC CCTGATCTAT CTGTGGACCG ACCTGGCGTT CTCCGTCATC
GTCTACCTCG CCGCGCTGCA GGACATCCCG ACCGACTGCC TGGAGGCGGC GCGCATCGAC
GGCGCGAATC GCTGGCAGCA GTTCCGGCAC GTCATCCTGC CGAGCCTGGC GCCGGTCACG
GTGTTCGTCG GGGTCTGGGA GACCATCTCG GTGCTGCAGA TCTTCGAGCT GATCCTGACC
ACCACGCACG GCGGACCGCT GGGAGCCAGC CAGACCATCG TGTACTTCAT CTACAACCAG
GCGTTCAACC TCTCCCGCTA CGGATACGGC TCGGCAGCTG CCTACACGCT GTTCGGCGCC
ACGCTGGTCA TCACCCTGGG ACTGTTCGCC TACGCCCGGC GCAGCAAGAT CGAGGCCTTC
TGA
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| Protein sequence | MKHGILISDH EKSGAAGRRR NARNAPVAEA GDGAVGDAAT VAKPKWTARR RRVVANLTGW
SFAAPATLII LGLTLFPAAW AFLISREHWN GITPARQIGW DNYRLMAQDP DFRSAVNHTV
LFTVLYVPVV LVLGMFLAIA LNRKIRFIAF YRTALFVPLV VSAAATGILA NFVFDQQFGL
ANNLLRVLHL PQQGFLANRH EVMWVIALIY LWTDLAFSVI VYLAALQDIP TDCLEAARID
GANRWQQFRH VILPSLAPVT VFVGVWETIS VLQIFELILT TTHGGPLGAS QTIVYFIYNQ
AFNLSRYGYG SAAAYTLFGA TLVITLGLFA YARRSKIEAF
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