More than 300 homologs were found in PanDaTox collection
for query gene Bfae_30860 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_30860  permease component of ABC-type sugar transporter  100 
 
 
350 aa  703    Brachybacterium faecium DSM 4810  Bacteria  normal  0.99166  n/a   
 
 
-
 
NC_012669  Bcav_1529  binding-protein-dependent transport systems inner membrane component  68.05 
 
 
318 aa  413  1e-114  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.165529  normal  0.149292 
 
 
-
 
NC_012669  Bcav_1506  binding-protein-dependent transport systems inner membrane component  51.24 
 
 
319 aa  274  1.0000000000000001e-72  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.172357  normal 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  45.89 
 
 
306 aa  254  2.0000000000000002e-66  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  41.39 
 
 
306 aa  236  5.0000000000000005e-61  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_008541  Arth_2946  binding-protein-dependent transport systems inner membrane component  43.99 
 
 
316 aa  232  7.000000000000001e-60  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12850  sn-glycerol-3-phosphate transport integral membrane protein ABC transporter ugpA  41.91 
 
 
303 aa  221  1.9999999999999999e-56  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00000000170243  normal 
 
 
-
 
NC_011886  Achl_2661  binding-protein-dependent transport systems inner membrane component  44.72 
 
 
320 aa  216  5e-55  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013521  Sked_18860  carbohydrate ABC transporter membrane protein  43.82 
 
 
316 aa  214  1.9999999999999998e-54  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.346815 
 
 
-
 
NC_009523  RoseRS_4568  binding-protein-dependent transport systems inner membrane component  39.06 
 
 
352 aa  211  1e-53  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0295  binding-protein-dependent transport systems inner membrane component  39.14 
 
 
306 aa  205  7e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0472746 
 
 
-
 
NC_012669  Bcav_0896  binding-protein-dependent transport systems inner membrane component  43.68 
 
 
314 aa  205  1e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17142  normal  0.200389 
 
 
-
 
NC_014158  Tpau_3529  binding-protein-dependent transport systems inner membrane component  38.05 
 
 
311 aa  204  2e-51  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  36.12 
 
 
313 aa  201  1.9999999999999998e-50  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  37.41 
 
 
307 aa  201  1.9999999999999998e-50  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  37.41 
 
 
307 aa  201  1.9999999999999998e-50  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_013174  Jden_2242  binding-protein-dependent transport systems inner membrane component  42.62 
 
 
311 aa  195  1e-48  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.556058 
 
 
-
 
NC_013172  Bfae_29890  carbohydrate ABC transporter membrane protein  40.21 
 
 
333 aa  194  2e-48  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0828  binding-protein-dependent transport systems inner membrane component  35.42 
 
 
316 aa  193  4e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.194369 
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  35.99 
 
 
317 aa  188  1e-46  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009767  Rcas_0115  binding-protein-dependent transport systems inner membrane component  39.4 
 
 
303 aa  187  2e-46  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.013229  normal 
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  32.57 
 
 
308 aa  186  5e-46  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  38.38 
 
 
305 aa  185  8e-46  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  36.59 
 
 
320 aa  185  1.0000000000000001e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  35.65 
 
 
320 aa  184  1.0000000000000001e-45  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  34.21 
 
 
309 aa  182  9.000000000000001e-45  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011886  Achl_3270  binding-protein-dependent transport systems inner membrane component  34.18 
 
 
321 aa  181  1e-44  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_010001  Cphy_0527  binding-protein-dependent transport systems inner membrane component  35.16 
 
 
296 aa  181  1e-44  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000283647  n/a   
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  34.52 
 
 
316 aa  181  2e-44  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3142  binding-protein-dependent transport systems inner membrane component  34.56 
 
 
325 aa  181  2e-44  Arthrobacter sp. FB24  Bacteria  normal  0.406302  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  31.94 
 
 
299 aa  178  1e-43  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  35.14 
 
 
294 aa  178  1e-43  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  33.01 
 
 
310 aa  177  2e-43  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  33.01 
 
 
310 aa  177  2e-43  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2801  binding-protein-dependent transport systems inner membrane component  35.93 
 
 
288 aa  178  2e-43  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.254018  n/a   
 
 
-
 
NC_013721  HMPREF0424_1290  ABC transporter, permease protein  36.4 
 
 
311 aa  177  2e-43  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  33.11 
 
 
310 aa  177  3e-43  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  35.23 
 
 
318 aa  176  5e-43  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  35 
 
 
314 aa  176  5e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  32.44 
 
 
310 aa  175  9e-43  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  32.78 
 
 
310 aa  175  9.999999999999999e-43  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  38.49 
 
 
317 aa  175  9.999999999999999e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_013172  Bfae_28370  carbohydrate ABC transporter membrane protein  33.45 
 
 
287 aa  175  9.999999999999999e-43  Brachybacterium faecium DSM 4810  Bacteria  normal  0.096742  n/a   
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  32.54 
 
 
308 aa  175  9.999999999999999e-43  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0623  putative glycerol-3-phosphate ABC transporter, permease protein  32.78 
 
 
310 aa  175  9.999999999999999e-43  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_0478  glycerol-3-phosphate ABC transporter, permease  32.78 
 
 
310 aa  174  1.9999999999999998e-42  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  32.44 
 
 
310 aa  174  1.9999999999999998e-42  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS0536  glycerol-3-phosphate ABC transporter permease  32.44 
 
 
310 aa  173  3.9999999999999995e-42  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0567  glycerol-3-phosphate ABC transporter permease protein  32.44 
 
 
310 aa  173  3.9999999999999995e-42  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  35.23 
 
 
318 aa  173  3.9999999999999995e-42  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  34.65 
 
 
321 aa  172  6.999999999999999e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  34.71 
 
 
292 aa  172  1e-41  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  34.73 
 
 
308 aa  170  4e-41  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  32.24 
 
 
316 aa  170  4e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0146  binding-protein-dependent transport systems inner membrane component  33.9 
 
 
292 aa  169  5e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0896196  normal 
 
 
-
 
NC_009616  Tmel_0752  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
288 aa  169  7e-41  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  31.79 
 
 
306 aa  169  8e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  36.4 
 
 
314 aa  167  2e-40  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  36.4 
 
 
314 aa  167  2e-40  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1100  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
300 aa  165  9e-40  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  32.88 
 
 
300 aa  165  9e-40  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  31.35 
 
 
309 aa  165  1.0000000000000001e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013946  Mrub_0044  binding-protein-dependent transport systems inner membrane component  34.65 
 
 
304 aa  165  1.0000000000000001e-39  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  33.75 
 
 
315 aa  165  1.0000000000000001e-39  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  34.21 
 
 
309 aa  164  2.0000000000000002e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_010001  Cphy_0593  binding-protein-dependent transport systems inner membrane component  32.07 
 
 
308 aa  164  2.0000000000000002e-39  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000379306  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  35.43 
 
 
317 aa  163  4.0000000000000004e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0290  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
297 aa  163  5.0000000000000005e-39  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3651  binding-protein-dependent transport systems inner membrane component  34.11 
 
 
301 aa  163  5.0000000000000005e-39  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0332234  normal 
 
 
-
 
NC_009654  Mmwyl1_2009  binding-protein-dependent transport systems inner membrane component  32.36 
 
 
291 aa  162  7e-39  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
316 aa  162  1e-38  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  33.11 
 
 
316 aa  161  1e-38  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_013947  Snas_0204  binding-protein-dependent transport systems inner membrane component  36.96 
 
 
299 aa  160  2e-38  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.497209  normal  0.169553 
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  33.54 
 
 
321 aa  160  3e-38  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2506  binding-protein-dependent transport systems inner membrane component  38.13 
 
 
306 aa  160  3e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000185658  n/a   
 
 
-
 
NC_007778  RPB_0176  binding-protein dependent transport system inner membrane protein  32.57 
 
 
314 aa  160  4e-38  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2610  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
334 aa  160  5e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.17709  normal 
 
 
-
 
NC_008782  Ajs_0861  binding-protein-dependent transport systems inner membrane component  33.11 
 
 
293 aa  159  8e-38  Acidovorax sp. JS42  Bacteria  normal  normal  0.533828 
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  31.27 
 
 
310 aa  159  9e-38  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  34 
 
 
305 aa  158  1e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0790  binding-protein-dependent transport systems inner membrane component  33.11 
 
 
293 aa  158  1e-37  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12339  sugar-transport integral membrane protein ABC transporter uspA  35.27 
 
 
290 aa  158  1e-37  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_5199  binding-protein-dependent transport systems inner membrane component  30.85 
 
 
312 aa  158  2e-37  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0867066 
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  34.3 
 
 
310 aa  158  2e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4882  binding-protein-dependent transport systems inner membrane component  35.56 
 
 
313 aa  158  2e-37  Conexibacter woesei DSM 14684  Bacteria  normal  0.115668  normal 
 
 
-
 
NC_009664  Krad_0386  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
304 aa  157  2e-37  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.610758  normal  0.0357706 
 
 
-
 
NC_012669  Bcav_4197  binding-protein-dependent transport systems inner membrane component  32.25 
 
 
326 aa  157  3e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.979447  normal 
 
 
-
 
NC_012848  Rleg_4750  binding-protein-dependent transport systems inner membrane component  32.21 
 
 
299 aa  156  4e-37  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.62916  normal  0.701692 
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  34 
 
 
318 aa  156  4e-37  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_010676  Bphyt_4587  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
325 aa  156  6e-37  Burkholderia phytofirmans PsJN  Bacteria  normal  0.351015  normal 
 
 
-
 
NC_014158  Tpau_1637  binding-protein-dependent transport systems inner membrane component  32.01 
 
 
303 aa  155  8e-37  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0695484  n/a   
 
 
-
 
NC_013172  Bfae_01820  permease component of ABC-type sugar transporter  32.78 
 
 
312 aa  155  9e-37  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  30.27 
 
 
294 aa  155  9e-37  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5469  binding-protein-dependent transport systems inner membrane component  31.79 
 
 
313 aa  155  1e-36  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.394829 
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  31.01 
 
 
296 aa  155  1e-36  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  34.54 
 
 
321 aa  155  1e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_009654  Mmwyl1_2714  binding-protein-dependent transport systems inner membrane component  32.2 
 
 
293 aa  155  1e-36  Marinomonas sp. MWYL1  Bacteria  normal  0.548655  normal 
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  34.24 
 
 
316 aa  155  1e-36  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_007948  Bpro_0856  binding-protein-dependent transport systems inner membrane component  32.2 
 
 
293 aa  154  2e-36  Polaromonas sp. JS666  Bacteria  normal  normal  0.565462 
 
 
-
 
NC_014212  Mesil_2465  binding-protein-dependent transport systems inner membrane component  34.48 
 
 
296 aa  154  2e-36  Meiothermus silvanus DSM 9946  Bacteria  normal  0.603266  normal  0.170133 
 
 
-
 
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