More than 300 homologs were found in PanDaTox collection
for query gene Tpau_1637 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_1637  binding-protein-dependent transport systems inner membrane component  100 
 
 
303 aa  606  9.999999999999999e-173  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0695484  n/a   
 
 
-
 
NC_012669  Bcav_2817  binding-protein-dependent transport systems inner membrane component  59 
 
 
310 aa  359  3e-98  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.822068  normal 
 
 
-
 
NC_013172  Bfae_07470  carbohydrate ABC transporter membrane protein  63.48 
 
 
304 aa  349  4e-95  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_1752  binding-protein-dependent transport systems inner membrane component  53.18 
 
 
314 aa  311  7.999999999999999e-84  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000089983 
 
 
-
 
NC_013235  Namu_1775  binding-protein-dependent transport systems inner membrane component  51.66 
 
 
309 aa  302  5.000000000000001e-81  Nakamurella multipartita DSM 44233  Bacteria  normal  0.114297  normal  0.0929805 
 
 
-
 
NC_008541  Arth_3385  binding-protein-dependent transport systems inner membrane component  53.04 
 
 
313 aa  286  2.9999999999999996e-76  Arthrobacter sp. FB24  Bacteria  normal  0.359427  n/a   
 
 
-
 
NC_010524  Lcho_3242  binding-protein-dependent transport systems inner membrane component  47.74 
 
 
317 aa  276  3e-73  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013521  Sked_01880  carbohydrate ABC transporter membrane protein  47.41 
 
 
318 aa  230  2e-59  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
305 aa  192  5e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0146  binding-protein-dependent transport systems inner membrane component  38.95 
 
 
292 aa  192  7e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0896196  normal 
 
 
-
 
NC_010001  Cphy_3401  binding-protein-dependent transport systems inner membrane component  36.61 
 
 
305 aa  190  2.9999999999999997e-47  Clostridium phytofermentans ISDg  Bacteria  normal  0.028536  n/a   
 
 
-
 
NC_013205  Aaci_0796  binding-protein-dependent transport systems inner membrane component  42.47 
 
 
312 aa  189  5e-47  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.633875  n/a   
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  36.61 
 
 
307 aa  187  2e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  35.54 
 
 
288 aa  185  7e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  35.03 
 
 
306 aa  183  4.0000000000000006e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
299 aa  182  7e-45  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0593  binding-protein-dependent transport systems inner membrane component  32.44 
 
 
308 aa  180  2e-44  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000379306  n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  31.65 
 
 
309 aa  180  2.9999999999999997e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  35.12 
 
 
317 aa  180  2.9999999999999997e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1699  binding-protein-dependent transport systems inner membrane component  37.58 
 
 
315 aa  180  2.9999999999999997e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.258357  normal 
 
 
-
 
NC_011886  Achl_3130  binding-protein-dependent transport systems inner membrane component  34.54 
 
 
314 aa  179  4.999999999999999e-44  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00699527 
 
 
-
 
NC_008541  Arth_3328  binding-protein-dependent transport systems inner membrane component  35.2 
 
 
314 aa  179  4.999999999999999e-44  Arthrobacter sp. FB24  Bacteria  normal  0.0166533  n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  35.59 
 
 
295 aa  179  4.999999999999999e-44  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  33.87 
 
 
316 aa  178  8e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  35.02 
 
 
296 aa  177  1e-43  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  34.24 
 
 
307 aa  177  2e-43  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  34.24 
 
 
307 aa  177  2e-43  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_012669  Bcav_3898  binding-protein-dependent transport systems inner membrane component  36.86 
 
 
324 aa  176  3e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  33.44 
 
 
308 aa  176  4e-43  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  35.13 
 
 
317 aa  176  4e-43  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  34.62 
 
 
306 aa  176  5e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2314  binding-protein-dependent transport systems inner membrane component  33.99 
 
 
310 aa  175  7e-43  Sinorhizobium medicae WSM419  Bacteria  normal  0.498676  normal  0.350334 
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  34.38 
 
 
321 aa  175  8e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  37.13 
 
 
322 aa  175  9e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  33.9 
 
 
308 aa  175  9.999999999999999e-43  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5739  ABC transporter permease  34.48 
 
 
318 aa  174  9.999999999999999e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.184804 
 
 
-
 
NC_013521  Sked_07100  carbohydrate ABC transporter membrane protein  37.14 
 
 
318 aa  174  1.9999999999999998e-42  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.790586  normal 
 
 
-
 
NC_013421  Pecwa_2200  binding-protein-dependent transport systems inner membrane component  36.04 
 
 
296 aa  173  2.9999999999999996e-42  Pectobacterium wasabiae WPP163  Bacteria  normal  0.467118  n/a   
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  33.97 
 
 
321 aa  173  3.9999999999999995e-42  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  34.11 
 
 
310 aa  173  3.9999999999999995e-42  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1907  binding-protein-dependent transport systems inner membrane component  36.04 
 
 
296 aa  172  3.9999999999999995e-42  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0961638  n/a   
 
 
-
 
NC_010483  TRQ2_0513  binding-protein-dependent transport systems inner membrane component  35.4 
 
 
285 aa  173  3.9999999999999995e-42  Thermotoga sp. RQ2  Bacteria  normal  0.195932  n/a   
 
 
-
 
NC_007413  Ava_0563  binding-protein dependent transport system inner membrane protein  34.8 
 
 
294 aa  172  5e-42  Anabaena variabilis ATCC 29413  Bacteria  normal  0.22835  normal  0.0558608 
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  33.78 
 
 
314 aa  172  6.999999999999999e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_014165  Tbis_3250  binding-protein-dependent transporter inner membrane component  38.4 
 
 
310 aa  172  7.999999999999999e-42  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  34.11 
 
 
310 aa  171  9e-42  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  35.82 
 
 
311 aa  171  1e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_014151  Cfla_1127  binding-protein-dependent transport systems inner membrane component  35.6 
 
 
328 aa  171  1e-41  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.190953  hitchhiker  0.00155627 
 
 
-
 
NC_013595  Sros_0295  ABC-type sugar transport system periplasmic component-like protein  35.29 
 
 
300 aa  170  2e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  37.55 
 
 
309 aa  171  2e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1969  binding-protein-dependent transport systems inner membrane component  35.69 
 
 
296 aa  170  2e-41  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
318 aa  171  2e-41  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  33.78 
 
 
310 aa  170  3e-41  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  33.56 
 
 
316 aa  170  3e-41  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_0623  putative glycerol-3-phosphate ABC transporter, permease protein  33.78 
 
 
310 aa  170  3e-41  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  34.49 
 
 
316 aa  170  3e-41  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_012880  Dd703_2034  binding-protein-dependent transport systems inner membrane component  35.34 
 
 
296 aa  169  4e-41  Dickeya dadantii Ech703  Bacteria  normal  0.963086  n/a   
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
300 aa  169  5e-41  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_2941  binding-protein-dependent transport systems inner membrane component  33.99 
 
 
320 aa  169  5e-41  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.974377  n/a   
 
 
-
 
NC_005957  BT9727_0478  glycerol-3-phosphate ABC transporter, permease  33.78 
 
 
310 aa  169  6e-41  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  34.84 
 
 
315 aa  169  8e-41  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  34.03 
 
 
310 aa  168  8e-41  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  33.33 
 
 
310 aa  168  9e-41  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  34.14 
 
 
306 aa  168  9e-41  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  35.79 
 
 
316 aa  167  1e-40  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS0536  glycerol-3-phosphate ABC transporter permease  33.44 
 
 
310 aa  168  1e-40  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0567  glycerol-3-phosphate ABC transporter permease protein  33.44 
 
 
310 aa  168  1e-40  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_05430  carbohydrate ABC transporter membrane protein  31.33 
 
 
321 aa  168  1e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0550121  normal 
 
 
-
 
NC_012669  Bcav_2978  binding-protein-dependent transport systems inner membrane component  37.76 
 
 
289 aa  167  2e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0559  binding-protein-dependent transport systems inner membrane component  35.81 
 
 
305 aa  167  2e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  33.56 
 
 
310 aa  167  2.9999999999999998e-40  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  34.88 
 
 
293 aa  166  2.9999999999999998e-40  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_0615  binding-protein-dependent transport systems inner membrane component  31.29 
 
 
296 aa  166  2.9999999999999998e-40  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2527  binding-protein-dependent transport systems inner membrane component  36.62 
 
 
309 aa  167  2.9999999999999998e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.849073  n/a   
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  32.56 
 
 
310 aa  166  2.9999999999999998e-40  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_008786  Veis_0803  binding-protein-dependent transport systems inner membrane component  35.29 
 
 
299 aa  166  4e-40  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.270687  normal 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  35.52 
 
 
305 aa  166  4e-40  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_29410  carbohydrate ABC transporter membrane protein  38.32 
 
 
322 aa  166  5.9999999999999996e-40  Brachybacterium faecium DSM 4810  Bacteria  normal  0.899558  n/a   
 
 
-
 
NC_013172  Bfae_29020  carbohydrate ABC transporter membrane protein  35.14 
 
 
275 aa  166  5.9999999999999996e-40  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  36.98 
 
 
287 aa  166  6.9999999999999995e-40  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2895  binding-protein-dependent transport systems inner membrane component  32.26 
 
 
316 aa  165  8e-40  Roseiflexus sp. RS-1  Bacteria  normal  0.0497455  normal 
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  34.52 
 
 
300 aa  165  9e-40  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  30.9 
 
 
294 aa  164  1.0000000000000001e-39  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_3811  binding-protein-dependent transport systems inner membrane component  34.21 
 
 
328 aa  164  1.0000000000000001e-39  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6585  lactose transport system (permease)  38.18 
 
 
306 aa  165  1.0000000000000001e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_4197  binding-protein-dependent transport systems inner membrane component  34.53 
 
 
326 aa  164  2.0000000000000002e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.979447  normal 
 
 
-
 
NC_007963  Csal_0259  binding-protein-dependent transport systems inner membrane component  34.73 
 
 
324 aa  164  2.0000000000000002e-39  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  34.6 
 
 
316 aa  164  2.0000000000000002e-39  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_010001  Cphy_0620  binding-protein-dependent transport systems inner membrane component  35.97 
 
 
305 aa  164  2.0000000000000002e-39  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000205165  n/a   
 
 
-
 
NC_013530  Xcel_2535  binding-protein-dependent transport systems inner membrane component  34.09 
 
 
314 aa  164  2.0000000000000002e-39  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20510  binding-protein-dependent transport systems inner membrane component  35.52 
 
 
290 aa  164  2.0000000000000002e-39  Halothermothrix orenii H 168  Bacteria  normal  0.0790749  n/a   
 
 
-
 
NC_012669  Bcav_1681  binding-protein-dependent transport systems inner membrane component  36.7 
 
 
316 aa  163  3e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.130846  normal 
 
 
-
 
NC_013595  Sros_3074  sugar ABC transporter permease protein  35.86 
 
 
307 aa  163  3e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.146884 
 
 
-
 
NC_010003  Pmob_0306  binding-protein-dependent transport systems inner membrane component  33.72 
 
 
294 aa  163  3e-39  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
309 aa  163  4.0000000000000004e-39  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008699  Noca_0870  binding-protein-dependent transport systems inner membrane component  31.84 
 
 
309 aa  163  4.0000000000000004e-39  Nocardioides sp. JS614  Bacteria  normal  0.800905  n/a   
 
 
-
 
NC_013172  Bfae_28370  carbohydrate ABC transporter membrane protein  35.16 
 
 
287 aa  163  4.0000000000000004e-39  Brachybacterium faecium DSM 4810  Bacteria  normal  0.096742  n/a   
 
 
-
 
NC_013521  Sked_11550  carbohydrate ABC transporter membrane protein  36.33 
 
 
354 aa  162  5.0000000000000005e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal  0.0144146 
 
 
-
 
NC_009436  Ent638_3289  binding-protein-dependent transport systems inner membrane component  34.98 
 
 
296 aa  162  5.0000000000000005e-39  Enterobacter sp. 638  Bacteria  normal  normal  0.243021 
 
 
-
 
NC_011894  Mnod_1414  binding-protein-dependent transport systems inner membrane component  36.1 
 
 
314 aa  162  6e-39  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
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