More than 300 homologs were found in PanDaTox collection
for query gene Bfae_07470 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_07470  carbohydrate ABC transporter membrane protein  100 
 
 
304 aa  605  9.999999999999999e-173  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1637  binding-protein-dependent transport systems inner membrane component  61.92 
 
 
303 aa  374  1e-103  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0695484  n/a   
 
 
-
 
NC_012669  Bcav_2817  binding-protein-dependent transport systems inner membrane component  58.88 
 
 
310 aa  360  2e-98  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.822068  normal 
 
 
-
 
NC_011886  Achl_1752  binding-protein-dependent transport systems inner membrane component  53.82 
 
 
314 aa  320  9.999999999999999e-87  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000089983 
 
 
-
 
NC_013235  Namu_1775  binding-protein-dependent transport systems inner membrane component  52.94 
 
 
309 aa  320  1.9999999999999998e-86  Nakamurella multipartita DSM 44233  Bacteria  normal  0.114297  normal  0.0929805 
 
 
-
 
NC_008541  Arth_3385  binding-protein-dependent transport systems inner membrane component  54.31 
 
 
313 aa  312  4.999999999999999e-84  Arthrobacter sp. FB24  Bacteria  normal  0.359427  n/a   
 
 
-
 
NC_010524  Lcho_3242  binding-protein-dependent transport systems inner membrane component  45.21 
 
 
317 aa  268  5.9999999999999995e-71  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013521  Sked_01880  carbohydrate ABC transporter membrane protein  40.13 
 
 
318 aa  214  1.9999999999999998e-54  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  36.99 
 
 
309 aa  207  2e-52  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  38.54 
 
 
288 aa  194  2e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
314 aa  192  5e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  36.84 
 
 
306 aa  191  9e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  34.59 
 
 
305 aa  190  2.9999999999999997e-47  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0796  binding-protein-dependent transport systems inner membrane component  41.55 
 
 
312 aa  189  2.9999999999999997e-47  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.633875  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  37.7 
 
 
309 aa  188  8e-47  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  35.64 
 
 
316 aa  188  1e-46  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
299 aa  184  1.0000000000000001e-45  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
317 aa  184  1.0000000000000001e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  37.54 
 
 
292 aa  183  2.0000000000000003e-45  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3898  binding-protein-dependent transport systems inner membrane component  36.77 
 
 
324 aa  183  3e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  36.58 
 
 
321 aa  183  4.0000000000000006e-45  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  38.98 
 
 
317 aa  181  1e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_012669  Bcav_1699  binding-protein-dependent transport systems inner membrane component  35.76 
 
 
315 aa  181  2e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.258357  normal 
 
 
-
 
NC_013526  Tter_2136  binding-protein-dependent transport systems inner membrane component  38.28 
 
 
307 aa  181  2e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  37.98 
 
 
316 aa  179  4e-44  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  36.97 
 
 
321 aa  179  4.999999999999999e-44  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  38.35 
 
 
283 aa  179  5.999999999999999e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  35.34 
 
 
306 aa  178  8e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0828  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
316 aa  178  1e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.194369 
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  34.74 
 
 
313 aa  177  1e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  36.69 
 
 
305 aa  177  2e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_013595  Sros_5739  ABC transporter permease  35.03 
 
 
318 aa  176  3e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.184804 
 
 
-
 
NC_008541  Arth_3328  binding-protein-dependent transport systems inner membrane component  36.97 
 
 
314 aa  176  3e-43  Arthrobacter sp. FB24  Bacteria  normal  0.0166533  n/a   
 
 
-
 
NC_009636  Smed_2314  binding-protein-dependent transport systems inner membrane component  34.1 
 
 
310 aa  176  3e-43  Sinorhizobium medicae WSM419  Bacteria  normal  0.498676  normal  0.350334 
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  33.11 
 
 
316 aa  176  4e-43  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  35.46 
 
 
312 aa  176  6e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  33.81 
 
 
315 aa  175  8e-43  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_009523  RoseRS_2895  binding-protein-dependent transport systems inner membrane component  32.27 
 
 
316 aa  175  9e-43  Roseiflexus sp. RS-1  Bacteria  normal  0.0497455  normal 
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  34.78 
 
 
300 aa  174  9.999999999999999e-43  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  36.15 
 
 
318 aa  175  9.999999999999999e-43  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  36.97 
 
 
316 aa  173  2.9999999999999996e-42  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  33 
 
 
316 aa  173  3.9999999999999995e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  35.55 
 
 
307 aa  172  5e-42  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  32.31 
 
 
321 aa  172  5e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  35.55 
 
 
307 aa  172  5e-42  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_013521  Sked_05430  carbohydrate ABC transporter membrane protein  32.36 
 
 
321 aa  172  5e-42  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0550121  normal 
 
 
-
 
NC_012669  Bcav_4197  binding-protein-dependent transport systems inner membrane component  34.53 
 
 
326 aa  172  5.999999999999999e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.979447  normal 
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  38.6 
 
 
322 aa  172  9e-42  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_005957  BT9727_0478  glycerol-3-phosphate ABC transporter, permease  32.98 
 
 
310 aa  171  1e-41  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0146  binding-protein-dependent transport systems inner membrane component  36.88 
 
 
292 aa  171  1e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0896196  normal 
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  33.9 
 
 
307 aa  170  2e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  32.41 
 
 
308 aa  171  2e-41  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3130  binding-protein-dependent transport systems inner membrane component  36.62 
 
 
314 aa  170  3e-41  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00699527 
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  37.72 
 
 
293 aa  170  3e-41  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_011370  Rleg2_6091  binding-protein-dependent transport systems inner membrane component  36.1 
 
 
292 aa  170  3e-41  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  34.12 
 
 
306 aa  170  3e-41  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  32.63 
 
 
310 aa  169  4e-41  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  32.63 
 
 
310 aa  169  4e-41  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  32.98 
 
 
310 aa  169  4e-41  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_11610  permease component of ABC-type sugar transporter  34.23 
 
 
311 aa  169  6e-41  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.117578  normal  0.102082 
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  32.09 
 
 
310 aa  169  7e-41  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  32.98 
 
 
310 aa  168  9e-41  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  32.63 
 
 
310 aa  167  1e-40  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2010  ABC transporter substrate binding inner membrane protein  33.89 
 
 
318 aa  168  1e-40  Psychromonas ingrahamii 37  Bacteria  normal  0.360583  normal 
 
 
-
 
NC_011773  BCAH820_0623  putative glycerol-3-phosphate ABC transporter, permease protein  32.63 
 
 
310 aa  167  1e-40  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009664  Krad_0590  binding-protein-dependent transport systems inner membrane component  37 
 
 
322 aa  168  1e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0414899  normal  0.0385996 
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  32.2 
 
 
294 aa  167  2e-40  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3250  binding-protein-dependent transporter inner membrane component  35.9 
 
 
310 aa  167  2e-40  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_29020  carbohydrate ABC transporter membrane protein  34.31 
 
 
275 aa  167  2e-40  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2535  binding-protein-dependent transport systems inner membrane component  36.14 
 
 
314 aa  167  2e-40  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0498  binding-protein-dependent transport systems inner membrane component  37.41 
 
 
317 aa  166  2.9999999999999998e-40  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000449996 
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  34.64 
 
 
293 aa  166  2.9999999999999998e-40  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  38.1 
 
 
310 aa  167  2.9999999999999998e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  36.47 
 
 
311 aa  166  5e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
292 aa  166  5e-40  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_005945  BAS0536  glycerol-3-phosphate ABC transporter permease  32.28 
 
 
310 aa  166  5.9999999999999996e-40  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0567  glycerol-3-phosphate ABC transporter permease protein  32.28 
 
 
310 aa  166  5.9999999999999996e-40  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  33.12 
 
 
317 aa  166  5.9999999999999996e-40  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_013595  Sros_6585  lactose transport system (permease)  34.88 
 
 
306 aa  165  8e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0563  binding-protein dependent transport system inner membrane protein  36.2 
 
 
294 aa  165  1.0000000000000001e-39  Anabaena variabilis ATCC 29413  Bacteria  normal  0.22835  normal  0.0558608 
 
 
-
 
NC_013525  Tter_0263  binding-protein-dependent transport systems inner membrane component  34.5 
 
 
317 aa  165  1.0000000000000001e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009664  Krad_3565  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
316 aa  164  1.0000000000000001e-39  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.702273  normal  0.0136241 
 
 
-
 
NC_009767  Rcas_1880  binding-protein-dependent transport systems inner membrane component  31.31 
 
 
316 aa  164  1.0000000000000001e-39  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.2607 
 
 
-
 
NC_013131  Caci_2030  binding-protein-dependent transport systems inner membrane component  37.36 
 
 
297 aa  164  2.0000000000000002e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.185813 
 
 
-
 
NC_013525  Tter_0507  binding-protein-dependent transport systems inner membrane component  38.23 
 
 
309 aa  164  2.0000000000000002e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_0290  binding-protein-dependent transport systems inner membrane component  35 
 
 
297 aa  164  2.0000000000000002e-39  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  32.4 
 
 
308 aa  163  3e-39  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_012669  Bcav_2875  binding-protein-dependent transport systems inner membrane component  34.3 
 
 
318 aa  163  3e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal  0.0272583 
 
 
-
 
NC_012669  Bcav_3983  binding-protein-dependent transport systems inner membrane component  35.09 
 
 
302 aa  163  4.0000000000000004e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.159905  normal 
 
 
-
 
NC_009654  Mmwyl1_2009  binding-protein-dependent transport systems inner membrane component  30.34 
 
 
291 aa  162  6e-39  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  35.05 
 
 
305 aa  162  6e-39  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  31 
 
 
300 aa  162  9e-39  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_0527  binding-protein-dependent transport systems inner membrane component  34.7 
 
 
296 aa  162  9e-39  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000283647  n/a   
 
 
-
 
NC_013525  Tter_1094  binding-protein-dependent transport systems inner membrane component  34.28 
 
 
307 aa  160  2e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_01820  permease component of ABC-type sugar transporter  33.44 
 
 
312 aa  160  2e-38  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0559  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
305 aa  160  2e-38  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0514  binding-protein-dependent transport systems inner membrane component  34.11 
 
 
335 aa  161  2e-38  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.950902  normal 
 
 
-
 
NC_012669  Bcav_3002  binding-protein-dependent transport systems inner membrane component  36.27 
 
 
320 aa  160  2e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_3401  binding-protein-dependent transport systems inner membrane component  32.13 
 
 
305 aa  161  2e-38  Clostridium phytofermentans ISDg  Bacteria  normal  0.028536  n/a   
 
 
-
 
NC_010622  Bphy_2350  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
317 aa  160  3e-38  Burkholderia phymatum STM815  Bacteria  normal  normal  0.143445 
 
 
-
 
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