| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0620 |
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| Symbol | |
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| ID | 5741669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 806729 |
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| End bp | 807646 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641291732 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001557746 |
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| Protein GI | 160878778 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000205165 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGATTT ATATGAAAAT AGATACAAAT GCTGTTGTGA AAGATAAAAA ATATAAAAAA
CGTGATTACA TGGGCCTTGT ATATGTAGCA CCTTGGGTTA TAGGCTTACT CATTTTTCAA
GCTTATCCTT TCATAAGTTC CTTGATTTAT TCATTTACCA AATATAATAT TGCGAGTATG
GAGTTTATCG GCTTTGATAA CTATATTCGT TTATTCAAAA TCGATAAAGA ATTTTATAAG
TCTGTTTTTG TTACGTTTGG GTATGTATTC ATGACGGTAC CCGGTAAATT AATTATGGCA
ATGATTGTTG CACTTATTTT AAATCAAAAA CTGAAAGGAA TTAATATTGT ACGAACTATT
TACTACATAC CTTCGTTGAT GGGTGGCAGT ATCGCAGTAT CGATTCTATG GAAATTGATG
TTTATGAGTG ATGGCGTTAT AAATAAAATG TTAGCACAAG TCGGTATTGT AGGCCCTAAT
TGGATTGGTG ATCCTAAGAC CGCGTTACCA ACTATCTGCT TATTAGAAAT CTGGCAGTTT
GGCTCCTCCA TGGTGCTATT ATTAGCTGCA TTAAAAGCTG TTCCTAAGGA ACTGTATGAG
GCAGCTAGTG TGGATGGCGC TAATAAATGG AGAATGTATT GGAAAATAAC ATTCCCCGCA
ATTTCTCCAA TCTTATTCTT TAATTTAATT ATGCAAACCA TACAGGCATT CCAGAACTTT
ACCTCAGCCT TTGTCATTAC CAATGGCGGA CCTAATAAAT CTACCTATGT GCTAGGGATG
AAATTATATA CCGAAGCGTT TAGTAATTTT AAAATGGGAT ACGCAAGTGC TGTTTCATGG
GTAATGTTTG TATTAATTAT GATAATGACC ATTGTATTAT TTAAGACATC AAATCGTTGG
GTTCATTATG ATGATTAA
|
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| Protein sequence | MEIYMKIDTN AVVKDKKYKK RDYMGLVYVA PWVIGLLIFQ AYPFISSLIY SFTKYNIASM
EFIGFDNYIR LFKIDKEFYK SVFVTFGYVF MTVPGKLIMA MIVALILNQK LKGINIVRTI
YYIPSLMGGS IAVSILWKLM FMSDGVINKM LAQVGIVGPN WIGDPKTALP TICLLEIWQF
GSSMVLLLAA LKAVPKELYE AASVDGANKW RMYWKITFPA ISPILFFNLI MQTIQAFQNF
TSAFVITNGG PNKSTYVLGM KLYTEAFSNF KMGYASAVSW VMFVLIMIMT IVLFKTSNRW
VHYDD
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