Gene Sros_0295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0295 
Symbol 
ID8663563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp280335 
End bp281237 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content66% 
IMG OID 
ProductABC-type sugar transport system periplasmic component-like protein 
Protein accessionYP_003336070 
Protein GI271961874 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCACCA TCTTCCGAAG GGCACCCTTC CAAAGGGCAC TCGGGCTCGC GTGGGTCATC 
CCCGCCCTCG CGCTGGTCGG GGTGTTCGTC TACCTGCCGC TCGTGCAGAA CTTCGGGTTC
AGCACGCTCA AGTGGGACAT CTACAGCGGC AGCCAGGAGT ACGTCGGGCT CGGGAACTAC
CGCAAGCTCG TCGACGACCC GGTCTTCTGG TCGTCGTTCG GCAACAACCT GCTGTACGCG
GTGGTCTCGA TCGCGTTCCA GGTGTTCGGC GCGCTCCTGC TGGCCGCGCT CGTCGAGAGC
ATCCGCAGCG AGCGGTGGCG GCGCGGCCTG CGGGCGATCT ACTTCATCCC CTCGGCGATC
TCGCTGACCG TCGCGGGCCT GCTCTTCTAC TTCGTCTACG AGCCCAACCT GGGCCTGCTC
AACCACGCGC TCGAAGCGGT GGGGCTGGGG CGGTTCGGCC AGTCCTGGCT GGGCCAGGGG
GACACCGCGA TGTTCGCGAT CATCGCGATG AGCCAGTGGC AGGGTTTCGG GTACTCCACC
CTGCTGTTCG CCGTCGCGAT CCAGCGCATC CCCTCCGAGA TCTACGGCGC CGCGGCCATC
GACGGCACCG GGCCGATCCG CCGCTTCGTC CACGTGACGG TCCCCCTGGT GCGCGAGATG
ACCGGCCTCA TGATGATGGT CACCATCTCG GGCGCGTTCC AGGTGTTCAA CGAGGTCATG
GTGATGACCG GCGGCGGTCC CGACAACTCG ACCCAGGTGC TGGGGACCTG GCTGTACCGC
AGCGGTTTCG TACGCAACAA CTTCGGCTAT GCCGCCGCGA TCGCGACAGT ACTCTTCGTG
ATCACGCTCG GCATCGCCAT GGCGCAGCTG TGGGTCACCC GCAGGAGAAG GGTGGAATGG
TGA
 
Protein sequence
MRTIFRRAPF QRALGLAWVI PALALVGVFV YLPLVQNFGF STLKWDIYSG SQEYVGLGNY 
RKLVDDPVFW SSFGNNLLYA VVSIAFQVFG ALLLAALVES IRSERWRRGL RAIYFIPSAI
SLTVAGLLFY FVYEPNLGLL NHALEAVGLG RFGQSWLGQG DTAMFAIIAM SQWQGFGYST
LLFAVAIQRI PSEIYGAAAI DGTGPIRRFV HVTVPLVREM TGLMMMVTIS GAFQVFNEVM
VMTGGGPDNS TQVLGTWLYR SGFVRNNFGY AAAIATVLFV ITLGIAMAQL WVTRRRRVEW