Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2895 |
Symbol | |
ID | 5209864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3613769 |
End bp | 3614719 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640596491 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001277213 |
Protein GI | 148657008 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0497455 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTACCA CATCTGTTTC TGTTGATCAG CAACGCGCTG CTGATCGGCG CTCCATGCGA CGCGAGATGA AACGAAATAT CTGGGCGTAT GTGTTTATCT CGCCGTTCTA CATCCTCTAT GCCGTCTTTG GCATGTTTCC GCTGCTGTAT GGCGTCTGGT TGAGCTTCTT CAAATGGGAC GGCATATCAC CGATGCAATG GATCGGTCTG CGCAACTATA CACGCCTGTT TGCCGATGAT ATCTGGTGGT ACGCCGTTTA CAACACGATC TGGCTGTTTT TCGGCGCAAC TGTGCCTCAG TTGACGATTG CTCTGATTCT GGCGTTCATT ATCAACAGCA ATTATATTCG CGGTAAGGAT ATTTACCGTG CGGCATTCTT CTCACCGTTC GTTGCATCTT CAGTCGCCAT CAGTATCGTT TTTCTCTCGA TTTTTGGTTC ACGCTACGGT TTGCTCAACT ATGCGCTCAG TTTCGTCGGA ATAGGTCCAA TTCGCTGGCT TGAAGATGCT GCGTGGATTA AACCTTCCAT TGCGATGGTT ATCATCTGGC AATGGACGGG ATACAGCATG ATCATTTTCC TTGCCGGTCT TCAGTCGATC AACACGGAGT TGTACGAAGC GGCAAAAGTC GATGGTGCGA GTACGCGTGA GGTCTTCTGG CATATCACCA TGCCGCTGAT GCGACCGGTG ATTCTGTTTC AGGTCATTCT GTCAATTATC GGCGCGATGC AGAACTTTGA TATTCCGGTG ATGCTGGCGG GCGGCACGCA ATCGTCGTCG CCAGGCGGCA CGGATCGTGC CGGGTTGGTG GCGATGGTGC AGTTGTACTG GACGGCGTTC AAGTATGGCG ATTTTGGCTA TGCTGCTGCG ATGGCATTGA TCCTCTTTTT CATGATCCTG GTGTTCAGCA TTGCCTACAA CCGCTGGCAG GGTCGCAACC CAACCGATTG A
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Protein sequence | MATTSVSVDQ QRAADRRSMR REMKRNIWAY VFISPFYILY AVFGMFPLLY GVWLSFFKWD GISPMQWIGL RNYTRLFADD IWWYAVYNTI WLFFGATVPQ LTIALILAFI INSNYIRGKD IYRAAFFSPF VASSVAISIV FLSIFGSRYG LLNYALSFVG IGPIRWLEDA AWIKPSIAMV IIWQWTGYSM IIFLAGLQSI NTELYEAAKV DGASTREVFW HITMPLMRPV ILFQVILSII GAMQNFDIPV MLAGGTQSSS PGGTDRAGLV AMVQLYWTAF KYGDFGYAAA MALILFFMIL VFSIAYNRWQ GRNPTD
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