Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0752 |
Symbol | |
ID | 5298150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 793699 |
End bp | 794565 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640769031 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001306000 |
Protein GI | 150020646 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGAAAGT TGACACCTTA TTTTCTTTTA ATCCCCACAT TTGTGGTAAT TATTCTTTTT ATATATATCC CTGCTTTTAA TTCCTTCAAG ATGAGTTTTT TCCAAGAAAC TTTTTTTGGA GACAAAAAGG TTTTTGTGGG ATTTGATAAT TATATTGATT TATTTACAGA TAGCGAATAT TATAACGTGC TAAAAAATAC GTTTATATAT TCATTTACAA GTGTAGGAAT AACTATTTTT TTGGCGTTTT TGATTTCACA ACTTTTGGTA CTAAATCTTC CAGGAACAAG GATTATTAGA ACCCTAATGT TTTCACCGTA TGCTGTTTCA CCGGCAATTT CTGCAACACT GTGGGCTATG TTGTTTACTC CAACTGCTGG TCTTTTAAGT TATTTATTTC AGATTACTTT TAATTTAGAT GTTAAATGGC TTACTACAAA ACCGTATGCA ATGATAGCAA TAATTGCGGC TACTGTATGG AAGATGCTTC CTTTTGACCT TATTTTTTAC ATTGCAGCAC TGCAGAATAT CCCCGATTCC ATTTTGGAAT CTTCATTAAT GGATGGAGCA AATAGTTGGA CAAGAATGTG GAGAATAAAG TTTCCACTTG TAACTCCAAT TACTTTTTAT CTTTTTATAA TGAATTTTAC AACTACTATG TTTTCTTCAT TTGGAATTAT AGATATTATG ACTCGTGGAG GACCATTAAA TAGTACAACA AATATGATTT ATAGACTTTA TTTGGATGGA TTTGCTTTTC AAGATAATGG TCTTGCATCG GCAGAATCTG TTGTAATGTT TAGTGTTATG TCGGTGATTA CGTATTTCTA TTTTAGGTTC GTTGAAAGAA AAGTACACTA TCAGTGA
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Protein sequence | MRKLTPYFLL IPTFVVIILF IYIPAFNSFK MSFFQETFFG DKKVFVGFDN YIDLFTDSEY YNVLKNTFIY SFTSVGITIF LAFLISQLLV LNLPGTRIIR TLMFSPYAVS PAISATLWAM LFTPTAGLLS YLFQITFNLD VKWLTTKPYA MIAIIAATVW KMLPFDLIFY IAALQNIPDS ILESSLMDGA NSWTRMWRIK FPLVTPITFY LFIMNFTTTM FSSFGIIDIM TRGGPLNSTT NMIYRLYLDG FAFQDNGLAS AESVVMFSVM SVITYFYFRF VERKVHYQ
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