More than 300 homologs were found in PanDaTox collection
for query gene TBFG_12339 on replicon NC_009565
Organism: Mycobacterium tuberculosis F11



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009565  TBFG_12339  sugar-transport integral membrane protein ABC transporter uspA  100 
 
 
290 aa  562  1.0000000000000001e-159  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0146  binding-protein-dependent transport systems inner membrane component  57.09 
 
 
292 aa  319  3.9999999999999996e-86  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0896196  normal 
 
 
-
 
NC_013172  Bfae_28370  carbohydrate ABC transporter membrane protein  51.41 
 
 
287 aa  306  4.0000000000000004e-82  Brachybacterium faecium DSM 4810  Bacteria  normal  0.096742  n/a   
 
 
-
 
NC_013205  Aaci_0796  binding-protein-dependent transport systems inner membrane component  43.4 
 
 
312 aa  210  2e-53  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.633875  n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  38.83 
 
 
292 aa  204  1e-51  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
309 aa  195  8.000000000000001e-49  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  37.33 
 
 
305 aa  190  2e-47  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  37.85 
 
 
309 aa  189  2.9999999999999997e-47  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  35.44 
 
 
299 aa  182  8.000000000000001e-45  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  37.31 
 
 
300 aa  181  1e-44  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  32.42 
 
 
308 aa  181  2e-44  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  39.93 
 
 
307 aa  179  4.999999999999999e-44  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  39.93 
 
 
307 aa  179  4.999999999999999e-44  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  32.09 
 
 
295 aa  179  4.999999999999999e-44  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  37.41 
 
 
309 aa  178  1e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  38.43 
 
 
322 aa  177  2e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_010524  Lcho_3242  binding-protein-dependent transport systems inner membrane component  37.68 
 
 
317 aa  176  4e-43  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  40.79 
 
 
316 aa  176  4e-43  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  34.81 
 
 
308 aa  176  4e-43  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  35.84 
 
 
283 aa  175  9e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  36.3 
 
 
306 aa  175  9.999999999999999e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20510  binding-protein-dependent transport systems inner membrane component  35.4 
 
 
290 aa  174  9.999999999999999e-43  Halothermothrix orenii H 168  Bacteria  normal  0.0790749  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  35.84 
 
 
310 aa  174  1.9999999999999998e-42  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_1290  ABC transporter, permease protein  38.37 
 
 
311 aa  173  1.9999999999999998e-42  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013947  Snas_3122  binding-protein-dependent transport systems inner membrane component  37.54 
 
 
305 aa  173  2.9999999999999996e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.99861  hitchhiker  0.000381845 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  39.51 
 
 
305 aa  172  5e-42  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  35.84 
 
 
310 aa  172  6.999999999999999e-42  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0623  putative glycerol-3-phosphate ABC transporter, permease protein  35.84 
 
 
310 aa  172  6.999999999999999e-42  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  35.84 
 
 
310 aa  172  6.999999999999999e-42  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  35.48 
 
 
310 aa  172  7.999999999999999e-42  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  35.48 
 
 
310 aa  172  7.999999999999999e-42  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  35.9 
 
 
309 aa  172  7.999999999999999e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  35.84 
 
 
310 aa  171  9e-42  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS0536  glycerol-3-phosphate ABC transporter permease  35.48 
 
 
310 aa  170  2e-41  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0478  glycerol-3-phosphate ABC transporter, permease  35.84 
 
 
310 aa  171  2e-41  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0567  glycerol-3-phosphate ABC transporter permease protein  35.48 
 
 
310 aa  170  2e-41  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  33.57 
 
 
315 aa  171  2e-41  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  35.93 
 
 
310 aa  171  2e-41  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_009667  Oant_0639  binding-protein-dependent transport systems inner membrane component  35.96 
 
 
305 aa  170  2e-41  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.371496  n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  33.94 
 
 
300 aa  170  3e-41  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013946  Mrub_0320  binding-protein-dependent transport systems inner membrane component  41.42 
 
 
310 aa  170  3e-41  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5739  ABC transporter permease  36.24 
 
 
318 aa  170  3e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.184804 
 
 
-
 
NC_013721  HMPREF0424_1315  ABC transporter, permease protein  33.81 
 
 
301 aa  169  6e-41  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  38.54 
 
 
306 aa  168  8e-41  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  37 
 
 
288 aa  168  9e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  36.86 
 
 
306 aa  168  9e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  36.18 
 
 
321 aa  167  1e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  34.55 
 
 
314 aa  166  4e-40  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  34.55 
 
 
314 aa  166  4e-40  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  36.94 
 
 
293 aa  166  4e-40  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  35.4 
 
 
310 aa  166  4e-40  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  38.01 
 
 
293 aa  166  5e-40  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_009636  Smed_2314  binding-protein-dependent transport systems inner membrane component  36.82 
 
 
310 aa  166  5e-40  Sinorhizobium medicae WSM419  Bacteria  normal  0.498676  normal  0.350334 
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  37.97 
 
 
317 aa  166  5.9999999999999996e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_013526  Tter_2506  binding-protein-dependent transport systems inner membrane component  39.1 
 
 
306 aa  165  6.9999999999999995e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000185658  n/a   
 
 
-
 
NC_006368  lpp1696  hypothetical protein  32.41 
 
 
292 aa  165  8e-40  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
294 aa  165  8e-40  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA1182  sugar ABC transporter, permease protein, putative  36.11 
 
 
319 aa  164  1.0000000000000001e-39  Brucella suis 1330  Bacteria  normal  0.547049  n/a   
 
 
-
 
NC_012034  Athe_2375  binding-protein-dependent transport systems inner membrane component  38.24 
 
 
298 aa  164  1.0000000000000001e-39  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  34.93 
 
 
313 aa  164  1.0000000000000001e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_15070  permease component of ABC-type sugar transporter  39.46 
 
 
311 aa  164  1.0000000000000001e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0771026  normal 
 
 
-
 
NC_012669  Bcav_0828  binding-protein-dependent transport systems inner membrane component  34.72 
 
 
316 aa  164  1.0000000000000001e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.194369 
 
 
-
 
NC_010001  Cphy_0527  binding-protein-dependent transport systems inner membrane component  34.46 
 
 
296 aa  164  1.0000000000000001e-39  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000283647  n/a   
 
 
-
 
NC_006369  lpl1695  hypothetical protein  32.41 
 
 
292 aa  164  2.0000000000000002e-39  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  35.19 
 
 
318 aa  163  2.0000000000000002e-39  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_011831  Cagg_2266  binding-protein-dependent transport systems inner membrane component  38.06 
 
 
296 aa  164  2.0000000000000002e-39  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.0000392628 
 
 
-
 
NC_009429  Rsph17025_3284  maltose-binding periplasmic protein  36.62 
 
 
293 aa  164  2.0000000000000002e-39  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0588261  normal 
 
 
-
 
NC_010084  Bmul_0299  binding-protein-dependent transport systems inner membrane component  36.31 
 
 
313 aa  164  2.0000000000000002e-39  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009504  BOV_A1085  putative sugar ABC transporter, permease protein  36.11 
 
 
319 aa  164  2.0000000000000002e-39  Brucella ovis ATCC 25840  Bacteria  normal  0.589946  n/a   
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  35.99 
 
 
294 aa  163  2.0000000000000002e-39  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_013521  Sked_18860  carbohydrate ABC transporter membrane protein  39.43 
 
 
316 aa  164  2.0000000000000002e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.346815 
 
 
-
 
NC_007510  Bcep18194_A3493  ABC sugar transporter, inner membrane subunit  38.03 
 
 
294 aa  163  3e-39  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  35.29 
 
 
320 aa  163  3e-39  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0957  binding-protein-dependent transport systems inner membrane component  39.43 
 
 
302 aa  163  3e-39  Meiothermus silvanus DSM 9946  Bacteria  normal  0.644081  normal  0.138738 
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  32.53 
 
 
296 aa  163  3e-39  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
318 aa  163  4.0000000000000004e-39  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  38.01 
 
 
293 aa  162  5.0000000000000005e-39  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3983  binding-protein-dependent transport systems inner membrane component  39.59 
 
 
302 aa  162  5.0000000000000005e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.159905  normal 
 
 
-
 
NC_012880  Dd703_0068  binding-protein-dependent transport systems inner membrane component  37.68 
 
 
315 aa  162  7e-39  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  33.56 
 
 
314 aa  162  9e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_008752  Aave_3651  binding-protein-dependent transport systems inner membrane component  34.92 
 
 
301 aa  161  9e-39  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0332234  normal 
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  35.48 
 
 
305 aa  162  9e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  33.81 
 
 
299 aa  161  9e-39  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  35.49 
 
 
308 aa  161  1e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_007347  Reut_A2051  binding-protein dependent transport system inner membrane protein  35.07 
 
 
293 aa  161  1e-38  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0647  binding-protein-dependent transport systems inner membrane component  35.34 
 
 
325 aa  161  1e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4568  binding-protein-dependent transport systems inner membrane component  33.12 
 
 
352 aa  161  1e-38  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_2710  binding-protein-dependent transport systems inner membrane component  37.19 
 
 
294 aa  161  1e-38  Burkholderia phymatum STM815  Bacteria  normal  0.0572034  normal 
 
 
-
 
NC_009050  Rsph17029_4021  binding-protein-dependent transport systems inner membrane component  35.21 
 
 
293 aa  160  2e-38  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  36.17 
 
 
316 aa  160  2e-38  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  32.62 
 
 
295 aa  160  2e-38  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1907  binding-protein-dependent transport systems inner membrane component  36.9 
 
 
296 aa  160  3e-38  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0961638  n/a   
 
 
-
 
NC_007948  Bpro_0856  binding-protein-dependent transport systems inner membrane component  34.72 
 
 
293 aa  160  3e-38  Polaromonas sp. JS666  Bacteria  normal  normal  0.565462 
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  34.03 
 
 
318 aa  160  3e-38  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  32.77 
 
 
320 aa  160  3e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  36.01 
 
 
313 aa  159  3e-38  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_007651  BTH_I3020  glycerol-3-phosphate ABC transporter, permease protein  39.66 
 
 
319 aa  159  4e-38  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1151  binding-protein-dependent transport systems inner membrane component  34.69 
 
 
314 aa  159  4e-38  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.59424  n/a   
 
 
-
 
NC_007494  RSP_3289  ABC glycerol-3-phosphate transporter, inner membrane subunit UgpA  35.21 
 
 
293 aa  159  5e-38  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2459  binding-protein-dependent transport systems inner membrane component  38.83 
 
 
331 aa  159  5e-38  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.216304  n/a   
 
 
-
 
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