| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0861 |
|---|
| Symbol | |
|---|
| ID | 4673349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 908587 |
|---|
| End bp | 909468 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639837984 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_985179 |
|---|
| Protein GI | 121593283 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.533828 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAC GCGTACTTTT CCGCTCGGCG TGGCTGCCCT GGGTGTTGAT CGCCCCGCAG
TTGCTCGTCA TCGGCATCTT CTTCTTCCTG CCCGCGGGCC AGGCCATCCT GCAGTCCTTC
CAGATGGAAG ACGCGTTTGG CATGAGCACC GAGTGGGTGG GGCTGGACAA CTTCAAGCAG
CTTTTCGACG ACCCGTCGTA TCTGGAATCC TTCCAGCGCA CGGCGTTGTT CTCGGTGCTG
GTGGCGGGCA TCGGCATCGT GGTGTCGCTG GCGCTGGCCA TCTTCGCGGA CCGCATCGTG
CGCTTTGCCA TGGTCTACAA GACCCTGCTC ATCGTGCCCT ATGCCGTGGC CCCGGTGATC
GCGGGCGTGC TGTGGGTGTT CTTGTTCTCG CCCTCCATCG GCGTGGTGAC CTACTACCTG
GGTGAGCTGG GCTACGGCTG GAACCACATG ATGAACGACA ACCAGGCCAT GACGCTGATC
GTCATCGCCT CGGTGTGGAA GCAGATCTCC TACAACTTCC TGTTCTTCCT GGCGGGCCTG
CAGTCGATTC CGAAGGCGCT GATCGAGGCG GCCTCCATCG ACGGCGCGGG TGCATGGCGG
CGCTTCTGGA ACATCCAGCT GCCGCTCTTG TCGCCCACCA CGTTCTTCCT GCTGGTGATC
AACATCGTGT ACGCCTTCTT TGACACCTTC GGCATCATCG ACGCGGCCAC GCAGGGCGGG
CCGGGGCAGT CCACGTCCAT CCTCGTCTAC AAGGTGTACC AGGACGGCTT CAAGGCGCTG
GACCTCGGCG GCTCGGCGGC GCAGTCCGTG ATCCTGATGC TGATCGTCAT CGCGCTCACC
GTGGTGCAGT TCCGCTACGT CGAGAAGAAA GTGCAGTACT GA
|
|---|
| Protein sequence | MEKRVLFRSA WLPWVLIAPQ LLVIGIFFFL PAGQAILQSF QMEDAFGMST EWVGLDNFKQ
LFDDPSYLES FQRTALFSVL VAGIGIVVSL ALAIFADRIV RFAMVYKTLL IVPYAVAPVI
AGVLWVFLFS PSIGVVTYYL GELGYGWNHM MNDNQAMTLI VIASVWKQIS YNFLFFLAGL
QSIPKALIEA ASIDGAGAWR RFWNIQLPLL SPTTFFLLVI NIVYAFFDTF GIIDAATQGG
PGQSTSILVY KVYQDGFKAL DLGGSAAQSV ILMLIVIALT VVQFRYVEKK VQY
|
|---|
| |