| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1529 |
|---|
| Symbol | |
|---|
| ID | 7859685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 1754483 |
|---|
| End bp | 1755439 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643865614 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002881547 |
|---|
| Protein GI | 229820021 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.165529 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.149292 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCCG TCGTCGACCC GCCGCGCCCC GGCCAGGCAG CGGTGGCGGC GCCGTCCCGG
CCGGTCACGC GGAACCGCCG CCGTTCGAAC CGCCGCGAGG CCCTCCTGTT CGGCGCGCTG
ATCCTGCCGA ACCTCGCCGC GATCCTCGTC TTCTCGTACT ACCCGACGAT CTACAACGTC
GTGCTGAGCT TCATGGACTG GGACATGGTC GCCGCCGCCC CGGAGTGGAT CGGGCTGGCC
AACTACCAGG ACCTGTTCAC GAGCGACGAC TTCTACACGG TCCTCGGGAA CACGGCGATC
TTCACGGGGG TCGCCGTCGT CGGGAGCCTC GCCGGCGGGC TCGCGATCGG CCAGCTGCTG
TCCCAGCGGC TGAAGTTCTC CGGCTTCACC CGCACGATGG CGTTCGCTCC GCACATGCTG
CCGGGCGCCG CCGTCGGCAT CCTCTGGCTG TTCATGTTCG ACCCCACGTA CGGGCTGAGC
CGTTGGTTCT TCGGGTTGTT CGGGCTCACG TCGCCCTCGT GGACGACGAC GTCGGACTGG
TCGATCTGGG CCATCACGAT CGCGTACACG TGGCAGCGCC TCGGCTTCGT CGCGATCATC
TACTACACGG CGATCCAGGA CCTCCCCCGC GACGTGTACG AGGCCGCCGA GCTCGACGGC
GCCCGGGGGT TCGGCCTGTT CTGGTCGATC ACGCGCCCGC TGCTCTCCCC CGTCACGTTC
TTCCTCACGG TGACCGGGAT CATCAGCGCC GCGCAGGCGT TCGACATCAT CGCGACGCTC
ACCGGCGGCG GGCCGGGCAA CTCGAGCGCC ACGCTCACGT GGATGGTCTA CGAGGAGGCG
TTCCAGCGGT TCGACGTCGG CACCTCCGCG GCGGCCGCGA CGGTCCTCTT CCTCGTGCTG
CTCGGCGTGA CCATCGTCCA GACCCGAACC GCCGGCAGGC AGGTGCACTA CTCATGA
|
|---|
| Protein sequence | MTAVVDPPRP GQAAVAAPSR PVTRNRRRSN RREALLFGAL ILPNLAAILV FSYYPTIYNV
VLSFMDWDMV AAAPEWIGLA NYQDLFTSDD FYTVLGNTAI FTGVAVVGSL AGGLAIGQLL
SQRLKFSGFT RTMAFAPHML PGAAVGILWL FMFDPTYGLS RWFFGLFGLT SPSWTTTSDW
SIWAITIAYT WQRLGFVAII YYTAIQDLPR DVYEAAELDG ARGFGLFWSI TRPLLSPVTF
FLTVTGIISA AQAFDIIATL TGGGPGNSSA TLTWMVYEEA FQRFDVGTSA AAATVLFLVL
LGVTIVQTRT AGRQVHYS
|
|---|
| |