Gene TBFG_12850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12850 
Symbol 
ID5223536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3152949 
End bp3153860 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content63% 
IMG OID640607616 
Productsn-glycerol-3-phosphate transport integral membrane protein ABC transporter ugpA 
Protein accessionYP_001288779 
Protein GI148824025 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones245 
Plasmid unclonability p-value0.00000000170243 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones244 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCGC CGCAACGAGC ACGGCTTCGG TCATCGAAAG AGCGCGTGCG CGATTATGCG 
CTGTTCGTCG TGTTGGTCGG CCCCAATGTG GCGCTATTGC TGCTGTTCGT CTATCGCCCG
TTGGCCGACA ACATCCGGCT GTCGTTCTTC GACTGGAACG TCTCCGATCC GTCGGCCCGA
TTTGTGGGGT TATCCAACTA CACCGAGTGG TTCACCCGGT CGGACACCCG CCAGATCGTG
TTCAACACGG CGGTTTTCAC CGGTGCCGCG GTGGTCGGCT CGATGGTGCT GGGGTTGGCG
CTGGCGATGC TGCTCGATCG ACCGTTGCGT GGACGAAACC TGGTGCGCTC CACTGTTTTC
GCGCCGTTCG TGATCTCCGG TGCCGCTGTC GGCCTGGCCG CCCAGTTCGT CTTCGACCCG
CATTTCGGTC TGATTCAAGA CCTGTTGCGC CGGATCGGGG TCGGGGTGCC CGACTTTTAC
CAGGATGCGC GCTGGGCGTT GTTCATGGTG ACCATCACCT ACGTCTGGAA GAACCTCGGC
TATACCTTCG TGATCTATCT GGCCGCGTTG CAGGGGGTAC GCCGAGATCT GTTGGAGGCG
GCCGAAATCG ACGGCGCCAG CCGGTGGGCC GTGTTCCGTC GAGTGCTGTT GCCGCAGCTG
CGGCCGACCA CGTTTTTCTT GTCGATCACC GTGCTGATCA ACTCGCTGCA GGTGTTCGAT
GTGATCAACG TGATGACCCG GGGCGGGCCG GAGGGCACCG GCACCACCAC CATGGTGTAC
CAGGTGTATG TGGAGACGTT CCGCAATTTC CGGGCCGGTT ATGGCGCCAC GGTGGCCACG
ATCATGTTCC TGGTGCTGCT GGCCGTGACG TACTACCAGG TGCGGGTGAT GGATCGGGGG
CAGCGGCAGT GA
 
Protein sequence
MAAPQRARLR SSKERVRDYA LFVVLVGPNV ALLLLFVYRP LADNIRLSFF DWNVSDPSAR 
FVGLSNYTEW FTRSDTRQIV FNTAVFTGAA VVGSMVLGLA LAMLLDRPLR GRNLVRSTVF
APFVISGAAV GLAAQFVFDP HFGLIQDLLR RIGVGVPDFY QDARWALFMV TITYVWKNLG
YTFVIYLAAL QGVRRDLLEA AEIDGASRWA VFRRVLLPQL RPTTFFLSIT VLINSLQVFD
VINVMTRGGP EGTGTTTMVY QVYVETFRNF RAGYGATVAT IMFLVLLAVT YYQVRVMDRG
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