Gene TBFG_12339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12339 
Symbol 
ID5223016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2599626 
End bp2600498 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content66% 
IMG OID640607096 
Productsugar-transport integral membrane protein ABC transporter uspA 
Protein accessionYP_001288270 
Protein GI148823516 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones434 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones247 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGACG CGCCACGTCG GAGGACGGCA CTGGCATATG CCCTGCTGGC GCCCAGCCTG 
GTGGGCGTGG TCGCCTTCTT GTTGCTGCCC ATCCTGGTGG TGGTATGGCT GAGCCTGCAC
CGGTGGGACT TGCTGGGCCC ACTGCGCTAC GTCGGCCTGA CCAACTGGCG GTCGGTGCTG
ACCGATTCCG GCTTCGCAGA CTCATTGGTG GTCACCGCCG TCTTCGTGGC GATCGTGGTC
CCGGCGCAGA CAGTACTGGG ACTGCTGGCC GCGTCCCTGC TGGCCCGGCG ACTGCCGGGC
ACCGGCCTGT TCCGCACGCT GTACGTGCTG CCCTGGATCT GTGCACCGCT GGCGATCGCG
GTGATGTGGC GCTGGATTGT GGCGCCCACC GACGGCGCGA TCAGCACTGT GCTCGGACAC
CGCATCGAAT GGCTCACCGA TCCAGGCCTC GCGCTTCCTG TGGTTTCGGC CGTCGTGGTG
TGGACCAACG TCGGATATGT CTCGTTGTTC TTCCTAGCCG GATTAATGGC GATTCCGCAG
GACATTCACA ACGCCGCACG CACCGACGGC GCCAGTGCCT GGCAGCGCTT CTGGCGCATC
ACCCTGCCCA TGTTGCGGCC CACCATGTTC TTCGTCCTGG TTACCGGAAT CATCAGCGCC
GCACAGGTTT TCGACACCGT CTACGCGCTG ACTGGCGGTG GGCCGCAGGG CAGCACCGAC
CTGGTGGCCC ACCGCATCTA CGCCGAGGCG TTTGGGGCCG CGGCAATCGG GCGGGCATCG
GTGATGGCGG TGGTGCTGTT CGTCATCCTG GTCGGTGCCA CCGTGGTGCA GCATCTGTAT
TTCCGGCGGC GGATCAGCTA TGAGCTCACC TAG
 
Protein sequence
MRDAPRRRTA LAYALLAPSL VGVVAFLLLP ILVVVWLSLH RWDLLGPLRY VGLTNWRSVL 
TDSGFADSLV VTAVFVAIVV PAQTVLGLLA ASLLARRLPG TGLFRTLYVL PWICAPLAIA
VMWRWIVAPT DGAISTVLGH RIEWLTDPGL ALPVVSAVVV WTNVGYVSLF FLAGLMAIPQ
DIHNAARTDG ASAWQRFWRI TLPMLRPTMF FVLVTGIISA AQVFDTVYAL TGGGPQGSTD
LVAHRIYAEA FGAAAIGRAS VMAVVLFVIL VGATVVQHLY FRRRISYELT