| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2242 |
|---|
| Symbol | |
|---|
| ID | 8381399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 2430652 |
|---|
| End bp | 2431587 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645005001 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003162181 |
|---|
| Protein GI | 256833454 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.556058 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACGC ACGATTTGGC GCAGACCACC CCCGCGACAC GGTCTCGCGC TTCGCTTCAC
CGGTGGCGGT TGTGGCGTCA GTACGCAGCG TTTGTTGCGT TAGCTGGTCC GAACGTTGCC
CTGCTGGTGG TGTTTACGTA CAAACCGTTA GTGGAGAGTT TCCGGTACTC CACATTGCAG
TGGAACATTG GGTCCCCAAC CGCACGTTTT GTGGGCTTGG ACAACTATGT TCAGTTCTTT
TCAAGCCCCA CCACTGCACA GGTACTGACG ACCACTGCTG TGTTCACGGT GACCACTGTC
GGTGGCGCAT TGGTTGCTGG TTTGGGATTG GCGCTACTCC TCAACCAGCG GCTCCTCGGC
CGGGGCATCG CCCGCACTTT GTCGTTTGCG CCGTACGTGT TGTCCGGGAT CGCTGTCGGC
ATTTTGTGGT TGTACATTTT TGATCCCCGC TACGGACTGT TGGGCACCGT CCTTGGGTGG
GTTGGCGTGA GTTCCCCCGA CTGGTACAAC ACCTCCCCGT GGGCGCTGAT CATGATCATC
ATCGTGTACC TGTGGAAACA CATAGGGTAT GTCGCTCTCA TCTATTTGGC TGGGTTGCAG
GCAATCCCCC AGGAAGTGCG GGACGCCGCC GCACTTGATG GTGCGGGCCG GTGGCGCACT
CTGCGCTCCA TTGTGTTGCC ATTACTTGGC CCCACCACAT TCTTCTTACT GGTCACCACG
CTTCTTGCCT CGTTGCAGTC CTTTGACCTC ATTCACGCGA TGACCCAAGG TGGCCCGCTT
GGGTCCACGA CGACGCTCAT GTATCAGATC TACCAAGAGT CCTTTGTCAA CGGCCGGGCT
GGGTACGCGT CCGCTGTTGC GACCGTGTTG TTCGTCTTGC TGCTCGTGGT CACCCTCATC
CAACTGAAGT TTGTCGAAAA GAAGGTGCAC TACTGA
|
|---|
| Protein sequence | MSTHDLAQTT PATRSRASLH RWRLWRQYAA FVALAGPNVA LLVVFTYKPL VESFRYSTLQ
WNIGSPTARF VGLDNYVQFF SSPTTAQVLT TTAVFTVTTV GGALVAGLGL ALLLNQRLLG
RGIARTLSFA PYVLSGIAVG ILWLYIFDPR YGLLGTVLGW VGVSSPDWYN TSPWALIMII
IVYLWKHIGY VALIYLAGLQ AIPQEVRDAA ALDGAGRWRT LRSIVLPLLG PTTFFLLVTT
LLASLQSFDL IHAMTQGGPL GSTTTLMYQI YQESFVNGRA GYASAVATVL FVLLLVVTLI
QLKFVEKKVH Y
|
|---|
| |