| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0856 |
|---|
| Symbol | |
|---|
| ID | 4011359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 876697 |
|---|
| End bp | 877578 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637940536 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_547710 |
|---|
| Protein GI | 91786758 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.565462 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAC GCGTCTTGTT CCGCTCAAGC TGGCTGCCGT GGCTGCTGCT GGCTCCCCAG
GTCATCGTGA TCAGCGTGTT TTTCTTCTGG CCCGCAGCGC AGGCGCTGCT GCAATCGTTC
CAGGTACAGG ATGCCTTTGG GAGCTCCACC GAATGGGTCG GCCTGGCCAA CTTTGAAAAC
CTGTTCAACG ATCCGGGTTA CCTGGCCTCC TTCAAAACCA CCGCGGTATT TTCCGTGCTG
GTGGCCGTGC TTGGTATCTC CTTGTCGCTG ACGCTGGCGA TCTTTGCAGA CCGCATCATC
AAGGGCGCGC TGTTTTACAA AACCTTGCTG GTCGTCCCCT ATGCAGTGGC CCCTGCCGTG
GCCGGTGTGC TGTGGGTGTT CATGTTTTCT CCGGCGCTGG GCGTGGTCGC CTATGCACTG
GACCGGGTGG GCATCAACTG GAACCACCTG CTCGATTCCG GCCACGCGAT GACGCTGATC
GTGATGGCCG CGGTGTGGAA GCAGATTTCC TACAACTTCC TGTTCTTCCT GGCCGGTCTG
CAGTCGATTC CCAAGTCACT GATCGAGGCC GCAGCGATTG ACGGTGCCCG CCCCTGGCGG
CGCTTCTGGA CGATCCAGTT CCCCCTGCTG TCACCCACCA CCTTCTTCCT GCTGGTGATC
AACATGGTGT ATGCCTTCTT CGACACGTTT GCCATCGTCG ACGCCACCAC CCATGGCGGC
CCCGGCCAGG ACACGTCCAT CCTGGTTTAC AAGGTCTATT ACGATGGCTT CAAGGCCATG
GACCTCGGCG GCTCAGCGGC GCAGTCGGTG GTCTTGATGT TCATCGTGAT TGCGCTGACG
GTGGTGCAGT TCCGGTATGT CGAAAAGAAA GTGCAATATT GA
|
|---|
| Protein sequence | MEKRVLFRSS WLPWLLLAPQ VIVISVFFFW PAAQALLQSF QVQDAFGSST EWVGLANFEN
LFNDPGYLAS FKTTAVFSVL VAVLGISLSL TLAIFADRII KGALFYKTLL VVPYAVAPAV
AGVLWVFMFS PALGVVAYAL DRVGINWNHL LDSGHAMTLI VMAAVWKQIS YNFLFFLAGL
QSIPKSLIEA AAIDGARPWR RFWTIQFPLL SPTTFFLLVI NMVYAFFDTF AIVDATTHGG
PGQDTSILVY KVYYDGFKAM DLGGSAAQSV VLMFIVIALT VVQFRYVEKK VQY
|
|---|
| |