Gene Rsph17029_4021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_4021 
Symbol 
ID4898727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp1166202 
End bp1167083 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content64% 
IMG OID640114624 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001045871 
Protein GI126464758 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCGCG CGCATTTCCC CCACCGCCTG CTTCCGTGGC TGCTGGTCGC CCCGCAGCTC 
CTGATCTCGG CCGTCTTCTT CTACTGGCCC GCGGGTCAGG CCCTCTGGCA GTCGATGCTG
CGCGAGGATG CCTTCGGGCT GAAATCCACC TTCGTGGGTT TCGCCAACTT CCGCCGCGTC
CTGTCCGATC CCGCCTGGCT CAACTCGATC CAGGTGACGG CGGTCTTCTC GCTGCTCACC
GCCTTCTTCT CGATGGCGAT CGCGCTCTTT CTCGCCGTGC AGGCCGAGAA GGTCGTGCGT
GGCCGCGGCT TCTACCGCAC GCTGATGATC TGGCCCTATG CGGTGGCCCC CGCCATCGCA
GGCATGCTCT GGCTCTTCAT GTTCAACCCC TCCTTCGGCA CGCTCGCCTG GCCCCTGCGC
CAGCTCGGCA TCCGCTGGGA TCCGCTGCTC GACGGGGAAC AGGCCATGGC GCTGGTGGTG
GCGGCCGCGA GCTGGAAGCA GATCAGCTAC AATTTCCTGT TCTTCGTCGC GGGATTGCAG
GCCATTCCTC GCTCACTGCT GGAAGCCGCG GCCATCGACG GCGCCACGGC CCGGCGGCGG
TTCTGGACCA TCACCTTCCC GCTTCTCGCG CCCACGACCT TCTTCCTGCT GGTGGTGAAC
TCGGTCTATG CGCTCTTCGA CACGTTCGGG ATCATCCATG CCGTCACGGG CGGCGGCCCC
GGCAAATCCA CCGAGACGCT GGTCTACAAG GTCTATAACG ACGGCTTCGT GAACCTGCGT
TTCGGCGATT CCGCGGCGCA GTCGGTGATC CTCATGGTGA TCGTGATCGC CCTCACCGCC
TTCCAGTTCA AATATATCGA ACGGAAAGTC CATTATGGCT GA
 
Protein sequence
MHRAHFPHRL LPWLLVAPQL LISAVFFYWP AGQALWQSML REDAFGLKST FVGFANFRRV 
LSDPAWLNSI QVTAVFSLLT AFFSMAIALF LAVQAEKVVR GRGFYRTLMI WPYAVAPAIA
GMLWLFMFNP SFGTLAWPLR QLGIRWDPLL DGEQAMALVV AAASWKQISY NFLFFVAGLQ
AIPRSLLEAA AIDGATARRR FWTITFPLLA PTTFFLLVVN SVYALFDTFG IIHAVTGGGP
GKSTETLVYK VYNDGFVNLR FGDSAAQSVI LMVIVIALTA FQFKYIERKV HYG