Gene VIBHAR_06397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06397 
Symbol 
ID5557501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1565981 
End bp1566862 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content49% 
IMG OID640910870 
Producthypothetical protein 
Protein accessionYP_001448515 
Protein GI156977609 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTCAC CTGTTGTTTT TAAACATAAA TGGCTTCCGG TTGCGTTGAT TGCACCTCAG 
TTATTGATCA CCTTGGTGTT CTTCATCTGG CCGGCAGGAC AAGCCATTTT CCAATCTTCA
CAACTTGAAG ATGCTTTCGG TATGAGCCGT GAGTTTGTGG GTTTGGAGAA CTTTGAAAAG
CTCTTCCATG ATCCACTGTA CCTAGATTCG TTAATGACCA CGCTGCAATT TAGCATCAGC
GTTGCGGTGC TCGCGTTGGT CAGTGCGCTT ATCCTTTCCG CTTTTGCCGA GCAAATCATC
CGCGGTGCAA CCATGTATCG TACATTCTTG ATTTGGCCTT ATGCGGTCGC TCCGGTTGTC
GCGGGTTCGC TGTGGTTATT CCTGTTCGAC CCAACCATCG GTGTGATGAC TGAGTTATTG
CATCTGTTTG GCGTAGACTG GAACCCAACG CTCAATGGCG CCCATGCAAT GTGGATGGTG
ATCATCACCT CGACATGGAA GCAAATCAGC TACAACTTTC TGTTCTTCCT TGCGGCGCTT
CAATCGGTAC CCAAGTCTCT GCACGAAGCT GCGGCCATTG ACGGAAGTGG TCCAATCAAA
CGCTTTATCA CTATTAGCTT CCCGCTGATT TCGCCAACCA GCTTCTTCTT GTTGGTCGTG
AACTTTGTCT ACGCGTTCTT TGATACGTTC GCCATCATCC ACGCGATGAC GCAAGGCGGC
CCGAGTAACA GCACTTCCAC CTTGGTTTAC AAAGTCTACA ACGATGGTTT TATTGGTCTG
GACTTAGGCT CATCGGCCGC GCAATCCGTC ATCCTGATGA TATTGGTCGC TTCCCTGACT
GTGATTCAAT TTAAGTATGT TGAGAAGAAG GTAGCGTACT AA
 
Protein sequence
MSSPVVFKHK WLPVALIAPQ LLITLVFFIW PAGQAIFQSS QLEDAFGMSR EFVGLENFEK 
LFHDPLYLDS LMTTLQFSIS VAVLALVSAL ILSAFAEQII RGATMYRTFL IWPYAVAPVV
AGSLWLFLFD PTIGVMTELL HLFGVDWNPT LNGAHAMWMV IITSTWKQIS YNFLFFLAAL
QSVPKSLHEA AAIDGSGPIK RFITISFPLI SPTSFFLLVV NFVYAFFDTF AIIHAMTQGG
PSNSTSTLVY KVYNDGFIGL DLGSSAAQSV ILMILVASLT VIQFKYVEKK VAY