Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06397 |
Symbol | |
ID | 5557501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 1565981 |
End bp | 1566862 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640910870 |
Product | hypothetical protein |
Protein accession | YP_001448515 |
Protein GI | 156977609 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCTCAC CTGTTGTTTT TAAACATAAA TGGCTTCCGG TTGCGTTGAT TGCACCTCAG TTATTGATCA CCTTGGTGTT CTTCATCTGG CCGGCAGGAC AAGCCATTTT CCAATCTTCA CAACTTGAAG ATGCTTTCGG TATGAGCCGT GAGTTTGTGG GTTTGGAGAA CTTTGAAAAG CTCTTCCATG ATCCACTGTA CCTAGATTCG TTAATGACCA CGCTGCAATT TAGCATCAGC GTTGCGGTGC TCGCGTTGGT CAGTGCGCTT ATCCTTTCCG CTTTTGCCGA GCAAATCATC CGCGGTGCAA CCATGTATCG TACATTCTTG ATTTGGCCTT ATGCGGTCGC TCCGGTTGTC GCGGGTTCGC TGTGGTTATT CCTGTTCGAC CCAACCATCG GTGTGATGAC TGAGTTATTG CATCTGTTTG GCGTAGACTG GAACCCAACG CTCAATGGCG CCCATGCAAT GTGGATGGTG ATCATCACCT CGACATGGAA GCAAATCAGC TACAACTTTC TGTTCTTCCT TGCGGCGCTT CAATCGGTAC CCAAGTCTCT GCACGAAGCT GCGGCCATTG ACGGAAGTGG TCCAATCAAA CGCTTTATCA CTATTAGCTT CCCGCTGATT TCGCCAACCA GCTTCTTCTT GTTGGTCGTG AACTTTGTCT ACGCGTTCTT TGATACGTTC GCCATCATCC ACGCGATGAC GCAAGGCGGC CCGAGTAACA GCACTTCCAC CTTGGTTTAC AAAGTCTACA ACGATGGTTT TATTGGTCTG GACTTAGGCT CATCGGCCGC GCAATCCGTC ATCCTGATGA TATTGGTCGC TTCCCTGACT GTGATTCAAT TTAAGTATGT TGAGAAGAAG GTAGCGTACT AA
|
Protein sequence | MSSPVVFKHK WLPVALIAPQ LLITLVFFIW PAGQAIFQSS QLEDAFGMSR EFVGLENFEK LFHDPLYLDS LMTTLQFSIS VAVLALVSAL ILSAFAEQII RGATMYRTFL IWPYAVAPVV AGSLWLFLFD PTIGVMTELL HLFGVDWNPT LNGAHAMWMV IITSTWKQIS YNFLFFLAAL QSVPKSLHEA AAIDGSGPIK RFITISFPLI SPTSFFLLVV NFVYAFFDTF AIIHAMTQGG PSNSTSTLVY KVYNDGFIGL DLGSSAAQSV ILMILVASLT VIQFKYVEKK VAY
|
| |