| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4135 |
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| Symbol | |
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| ID | 7971872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4376479 |
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| End bp | 4377360 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644794721 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002946014 |
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| Protein GI | 239817104 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAC GCGTTTTCTT TCGCTCAGGC TGGTTGCCCT GGCTGCTGCT GACCCCGCAA
ATGGCGGTGA TCCTCGTGTT TTTCTTCTGG CCGGCGGCGC AGGCGCTGCT GCAGTCGCTG
CAGCAGCAGG ACGCCTTCGG CACGTCGGTG GAATTTGTCG GGCTCGACAA CTTCCGCCAG
ATATTCAGCG ATCCGAGCTA TGTGGAGTCG TTCAAGACCA CCGCCCTGTT CTCGGTGCTG
GTGGCGGGCA TCGGCATCAC GCTGTCGCTG GGGCTCGCGG TGTTTGCCGA CCGCATCACG
CGCGGCGGCA CCTTCTACAA GACCATGCTG ATCCTGCCCT ACGCGGTGGC GCCCGCCGTG
GCGGCCGTGC TCTGGGTGTT CATGTTCTCG CCGTCGCTGG GCGTGGTGGC CTATGCGCTC
GGCAAGATCG GCATCGACTG GAACCACCTG CTGGACTCCG GCCACGCCAT GACGCTGATC
GTGATGGCCT CGGTGTGGAA GCAGATTTCG TACAACTTCC TGTTCTTCCT GGCCGGCCTG
CAGTCGATTC CCAAGTCGCT CATCGAGGCC GCGGCTATCG ACGGCGCGCG CCCGTGGCGC
CGGTTCTGGA CCGTGCAGTT TCCGCTGCTC TCGCCCACCA CCTTCTTCCT GCTGGTGATC
AACGTGGTCT ACGCCTTCTT CGACACCTTC GCGATCGTCG ATGCGGCCAC CCAGGGCGGG
CCGGGCAAGG ACACGGCCAT CCTGGTCTAC AAGGTCTACT ACGACGGCTT CAAGGCCATG
GACCTCGGCG GCTCGGCGGC GCAGTCGGTG GTGCTGATGG TGATCGTGGT GGCGCTCACC
GTGATCCAGT TCCGCTACGT GGAAAAGAAG GTTCAATACT GA
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| Protein sequence | MEKRVFFRSG WLPWLLLTPQ MAVILVFFFW PAAQALLQSL QQQDAFGTSV EFVGLDNFRQ
IFSDPSYVES FKTTALFSVL VAGIGITLSL GLAVFADRIT RGGTFYKTML ILPYAVAPAV
AAVLWVFMFS PSLGVVAYAL GKIGIDWNHL LDSGHAMTLI VMASVWKQIS YNFLFFLAGL
QSIPKSLIEA AAIDGARPWR RFWTVQFPLL SPTTFFLLVI NVVYAFFDTF AIVDAATQGG
PGKDTAILVY KVYYDGFKAM DLGGSAAQSV VLMVIVVALT VIQFRYVEKK VQY
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