More than 300 homologs were found in PanDaTox collection
for query gene Hoch_5845 on replicon NC_013440
Organism: Haliangium ochraceum DSM 14365



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013440  Hoch_5845  response regulator receiver protein  100 
 
 
195 aa  377  1e-104  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.683493 
 
 
-
 
NC_007404  Tbd_2690  two component Fis family transcriptional regulator  28.65 
 
 
179 aa  70.1  0.00000000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  36.21 
 
 
494 aa  69.7  0.00000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0823  type 4 fimbriae expression regulatory protein pilR  32.03 
 
 
446 aa  65.9  0.0000000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_4257  two component, sigma54 specific, Fis family transcriptional regulator  32.38 
 
 
463 aa  65.9  0.0000000004  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_03380  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  37.17 
 
 
153 aa  64.3  0.000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1607  two component Fis family transcriptional regulator  28.27 
 
 
185 aa  64.3  0.000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.016434  n/a   
 
 
-
 
NC_011891  A2cp1_2343  two component transcriptional regulator, Fis family  28.27 
 
 
185 aa  64.3  0.000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.888574  n/a   
 
 
-
 
NC_011145  AnaeK_2255  two component transcriptional regulator, Fis family  28.27 
 
 
185 aa  64.3  0.000000001  Anaeromyxobacter sp. K  Bacteria  normal  0.0449716  n/a   
 
 
-
 
NC_009675  Anae109_2205  two component Fis family transcriptional regulator  27.93 
 
 
182 aa  63.9  0.000000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.143694 
 
 
-
 
NC_007005  Psyr_0722  helix-turn-helix, Fis-type  32.79 
 
 
445 aa  63.2  0.000000003  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4313  multi-sensor hybrid histidine kinase  38.81 
 
 
965 aa  62.8  0.000000003  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.975749 
 
 
-
 
NC_009831  Ssed_4069  two component Fis family transcriptional regulator  27.92 
 
 
200 aa  63.2  0.000000003  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_2740  two component, sigma54 specific, transcriptional regulator, Fis family  30.69 
 
 
475 aa  62.4  0.000000004  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2835  two component, sigma54 specific, transcriptional regulator, Fis family  30.69 
 
 
475 aa  62  0.000000005  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.019348  n/a   
 
 
-
 
NC_008782  Ajs_1641  two component transcriptional regulator  33.86 
 
 
243 aa  62  0.000000005  Acidovorax sp. JS42  Bacteria  normal  0.179821  normal  0.0712727 
 
 
-
 
NC_003296  RS02235  composite two-component sensor kinase and response regulator hybrid transcription regulator protein  34.92 
 
 
796 aa  60.5  0.00000001  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_46550  response regulator  31.82 
 
 
267 aa  60.8  0.00000001  Azotobacter vinelandii DJ  Bacteria  normal  0.0203573  n/a   
 
 
-
 
NC_007908  Rfer_2540  two component transcriptional regulator  33.33 
 
 
228 aa  60.8  0.00000001  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4253  two component transcriptional regulator  34.31 
 
 
228 aa  61.2  0.00000001  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_2709  response regulator receiver sensor signal transduction histidine kinase  34.78 
 
 
501 aa  60.5  0.00000001  Desulfovibrio vulgaris DP4  Bacteria  normal  0.710197  normal  0.745824 
 
 
-
 
NC_013173  Dbac_3323  two component, sigma54 specific, transcriptional regulator, Fis family  24.56 
 
 
458 aa  61.2  0.00000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.581416  n/a   
 
 
-
 
NC_011984  Avi_9103  multi-sensor hybrid histidine kinase  33.93 
 
 
1145 aa  60.1  0.00000002  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A4357  two component transcriptional regulator  30.88 
 
 
252 aa  60.1  0.00000002  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_2075  response regulator receiver sensor hybrid histidine kinase  33.59 
 
 
572 aa  60.5  0.00000002  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_2268  two component, sigma54 specific, transcriptional regulator, Fis family  35.65 
 
 
459 aa  60.5  0.00000002  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.00701331 
 
 
-
 
NC_009656  PSPA7_1922  putative two-component response regulator  27.42 
 
 
225 aa  60.1  0.00000002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.804247  n/a   
 
 
-
 
NC_007516  Syncc9605_1839  two component transcriptional regulator  32.58 
 
 
255 aa  59.3  0.00000003  Synechococcus sp. CC9605  Bacteria  normal  0.1183  normal 
 
 
-
 
NC_007519  Dde_1016  two component Fis family transcriptional regulator  29.85 
 
 
490 aa  59.3  0.00000003  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.0838008  n/a   
 
 
-
 
NC_010571  Oter_1103  histidine kinase  33.06 
 
 
531 aa  59.3  0.00000003  Opitutus terrae PB90-1  Bacteria  normal  0.458922  normal 
 
 
-
 
NC_008789  Hhal_1965  two component LuxR family transcriptional regulator  29.85 
 
 
217 aa  59.3  0.00000003  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0621  two component, sigma54 specific, Fis family transcriptional regulator  29.31 
 
 
472 aa  59.7  0.00000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_0247  nitrogen metabolism transcriptional regulator, NtrC, Fis family  30.63 
 
 
485 aa  58.9  0.00000004  Sphingomonas wittichii RW1  Bacteria  normal  0.898521  normal  0.0558214 
 
 
-
 
NC_014150  Bmur_0931  response regulator receiver protein  28.32 
 
 
430 aa  58.9  0.00000004  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2618  two component, sigma54 specific, transcriptional regulator, Fis family  32.48 
 
 
453 aa  58.9  0.00000004  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.153552  n/a   
 
 
-
 
NC_011368  Rleg2_5393  GAF sensor hybrid histidine kinase  40.17 
 
 
2099 aa  59.3  0.00000004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0480029  normal  0.0859175 
 
 
-
 
NC_008752  Aave_1900  multi-sensor hybrid histidine kinase  37.29 
 
 
1057 aa  58.9  0.00000004  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.053752 
 
 
-
 
NC_013517  Sterm_1133  two component transcriptional regulator, winged helix family  30.17 
 
 
217 aa  58.9  0.00000005  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_22760  putative two-component response regulator  26.88 
 
 
225 aa  58.5  0.00000005  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0539892 
 
 
-
 
NC_008740  Maqu_2223  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  30.89 
 
 
725 aa  58.5  0.00000005  Marinobacter aquaeolei VT8  Bacteria  normal  0.847933  n/a   
 
 
-
 
NC_013385  Adeg_2019  response regulator receiver protein  29.66 
 
 
123 aa  58.5  0.00000006  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_2651  two component, sigma54 specific, Fis family transcriptional regulator  32.46 
 
 
483 aa  58.2  0.00000007  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.410338  n/a   
 
 
-
 
NC_013595  Sros_7254  response regulator receiver protein  32.03 
 
 
225 aa  58.5  0.00000007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.122444 
 
 
-
 
NC_011992  Dtpsy_2271  two component transcriptional regulator, Fis family  29.61 
 
 
177 aa  58.2  0.00000007  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2781  two component Fis family transcriptional regulator  29.61 
 
 
177 aa  58.2  0.00000007  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_05120  osmolarity response regulator  26.81 
 
 
246 aa  58.2  0.00000008  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0962  two component, sigma54 specific, transcriptional regulator, Fis family  31.62 
 
 
458 aa  58.2  0.00000008  Geobacter sp. M21  Bacteria  n/a    normal  0.277353 
 
 
-
 
NC_010814  Glov_3601  response regulator receiver sensor signal transduction histidine kinase  29.51 
 
 
399 aa  58.2  0.00000009  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_3889  PAS/PAC sensor hybrid histidine kinase  33.87 
 
 
794 aa  57.8  0.0000001  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1796  multi-sensor hybrid histidine kinase  29.63 
 
 
1965 aa  57.8  0.0000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_0437  two component, sigma54 specific, Fis family transcriptional regulator  31.03 
 
 
490 aa  57.8  0.0000001  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1502  response regulator receiver protein  26.47 
 
 
177 aa  57.8  0.0000001  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.233016  normal  0.368331 
 
 
-
 
NC_011891  A2cp1_0324  two component, sigma54 specific, transcriptional regulator, Fis family  30.48 
 
 
465 aa  57.4  0.0000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.266606  n/a   
 
 
-
 
NC_008340  Mlg_1641  response regulator receiver protein  25.42 
 
 
183 aa  57.8  0.0000001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.772734  normal 
 
 
-
 
NC_010678  Rpic_3777  PAS/PAC sensor hybrid histidine kinase  33.87 
 
 
794 aa  57.8  0.0000001  Ralstonia pickettii 12J  Bacteria  normal  0.410783  normal  0.29106 
 
 
-
 
NC_011145  AnaeK_0313  two component, sigma54 specific, transcriptional regulator, Fis family  30.48 
 
 
465 aa  57.4  0.0000001  Anaeromyxobacter sp. K  Bacteria  normal  0.0494225  n/a   
 
 
-
 
NC_011769  DvMF_1461  two component, sigma54 specific, transcriptional regulator, Fis family  33.9 
 
 
491 aa  57.4  0.0000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.750458 
 
 
-
 
NC_011666  Msil_2511  two component transcriptional regulator, winged helix family  31.25 
 
 
244 aa  57  0.0000002  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009439  Pmen_1831  two component transcriptional regulator  27.98 
 
 
225 aa  57  0.0000002  Pseudomonas mendocina ymp  Bacteria  normal  0.989444  normal  0.522163 
 
 
-
 
NC_007298  Daro_1980  osmolarity response regulator  25.93 
 
 
243 aa  56.6  0.0000002  Dechloromonas aromatica RCB  Bacteria  normal  0.431202  normal  0.459947 
 
 
-
 
NC_007413  Ava_4807  multi-sensor hybrid histidine kinase  28.23 
 
 
1287 aa  56.6  0.0000002  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00341781  normal  0.634217 
 
 
-
 
NC_007520  Tcr_0470  two component Fis family transcriptional regulator  22.68 
 
 
199 aa  56.6  0.0000002  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.00000242872  n/a   
 
 
-
 
NC_007760  Adeh_0302  two component, sigma54 specific, Fis family transcriptional regulator  30.48 
 
 
465 aa  56.6  0.0000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009714  CHAB381_0745  two-component regulator  30.1 
 
 
223 aa  57  0.0000002  Campylobacter hominis ATCC BAA-381  Bacteria  normal  0.802142  n/a   
 
 
-
 
NC_010505  Mrad2831_1492  two component, sigma54 specific, Fis family transcriptional regulator  35.29 
 
 
454 aa  57  0.0000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.649493  normal  0.276422 
 
 
-
 
NC_007958  RPD_2513  ATP-binding region, ATPase-like  31.4 
 
 
945 aa  56.6  0.0000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.543755  normal  0.160676 
 
 
-
 
NC_009438  Sputcn32_3846  osmolarity response regulator  28.97 
 
 
241 aa  56.6  0.0000002  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5557  two component transcriptional regulator, LuxR family  30.77 
 
 
223 aa  57  0.0000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.496641  normal 
 
 
-
 
NC_008346  Swol_1041  response regulator receiver protein  31.17 
 
 
365 aa  56.6  0.0000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1376  response regulator receiver and unknown domain protein  33.33 
 
 
226 aa  56.6  0.0000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_0614  response regulator receiver protein  33.93 
 
 
346 aa  56.6  0.0000002  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.00000000792989 
 
 
-
 
NC_011146  Gbem_3286  two component, sigma54 specific, transcriptional regulator, Fis family  30.77 
 
 
458 aa  56.6  0.0000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0199  two component, sigma54 specific, transcriptional regulator, Fis family  28.04 
 
 
451 aa  56.6  0.0000002  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  0.940712  n/a   
 
 
-
 
NC_002939  GSU0963  sigma-54 dependent DNA-binding response regulator  32.5 
 
 
467 aa  56.2  0.0000003  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_0751  two component, sigma54 specific, transcriptional regulator, Fis family  29.06 
 
 
490 aa  56.2  0.0000003  Spirosoma linguale DSM 74  Bacteria  normal  0.664159  normal 
 
 
-
 
NC_010571  Oter_0463  PAS/PAC sensor hybrid histidine kinase  31.25 
 
 
642 aa  56.2  0.0000003  Opitutus terrae PB90-1  Bacteria  normal  normal  0.683271 
 
 
-
 
NC_010814  Glov_2289  response regulator receiver protein  29.06 
 
 
135 aa  55.8  0.0000003  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1299  two component transcriptional regulator, winged helix family  29.23 
 
 
242 aa  55.8  0.0000003  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0317425  normal  0.569469 
 
 
-
 
NC_010087  Bmul_5538  PAS/PAC sensor hybrid histidine kinase  31.62 
 
 
760 aa  56.2  0.0000003  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.00762207 
 
 
-
 
NC_007948  Bpro_2008  two component transcriptional regulator  31.48 
 
 
251 aa  56.2  0.0000003  Polaromonas sp. JS666  Bacteria  normal  0.857325  normal 
 
 
-
 
NC_013510  Tcur_3363  two component transcriptional regulator, winged helix family  30.08 
 
 
233 aa  56.2  0.0000003  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00866984  n/a   
 
 
-
 
NC_010571  Oter_1407  two component transcriptional regulator  32.71 
 
 
265 aa  56.2  0.0000003  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2454  response regulator receiver  33.04 
 
 
334 aa  55.8  0.0000003  Salinispora tropica CNB-440  Bacteria  normal  0.811467  normal  0.554659 
 
 
-
 
NC_009675  Anae109_2620  two component, sigma54 specific, Fis family transcriptional regulator  31.45 
 
 
532 aa  56.2  0.0000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0658498  normal 
 
 
-
 
NC_010676  Bphyt_5296  PAS/PAC sensor hybrid histidine kinase  34.51 
 
 
776 aa  56.2  0.0000003  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009707  JJD26997_1603  DNA-binding response regulator  27.18 
 
 
223 aa  56.2  0.0000003  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.72895  n/a   
 
 
-
 
NC_011662  Tmz1t_2259  osmolarity response regulator  27.64 
 
 
257 aa  55.8  0.0000004  Thauera sp. MZ1T  Bacteria  normal  0.0634187  n/a   
 
 
-
 
NC_003912  CJE0404  DNA-binding response regulator  27.18 
 
 
223 aa  55.5  0.0000004  Campylobacter jejuni RM1221  Bacteria  normal  0.887957  n/a   
 
 
-
 
NC_007492  Pfl01_4840  two-component response regulator PilR  31.09 
 
 
448 aa  55.8  0.0000004  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.43512  normal  0.760188 
 
 
-
 
NC_010557  BamMC406_6378  response regulator receiver protein  34.38 
 
 
158 aa  55.8  0.0000004  Burkholderia ambifaria MC40-6  Bacteria  normal  0.545178  normal  0.378734 
 
 
-
 
NC_011126  HY04AAS1_1332  two component, sigma54 specific, transcriptional regulator, Fis family  26.32 
 
 
439 aa  55.8  0.0000004  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_0172  osmolarity response regulator  28.7 
 
 
239 aa  55.8  0.0000004  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3637  osmolarity response regulator  28.97 
 
 
241 aa  55.8  0.0000004  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3011  two component transcriptional regulator, winged helix family  34.26 
 
 
226 aa  55.8  0.0000004  Variovorax paradoxus S110  Bacteria  normal  0.267721  n/a   
 
 
-
 
NC_010159  YpAngola_A3741  osmolarity response regulator  28.7 
 
 
239 aa  55.8  0.0000004  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_4017  osmolarity response regulator  28.97 
 
 
241 aa  55.8  0.0000004  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008787  CJJ81176_0379  DNA-binding response regulator  27.18 
 
 
223 aa  55.5  0.0000004  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_3950  histidine kinase  29.17 
 
 
589 aa  55.8  0.0000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.695685  normal  0.365281 
 
 
-
 
NC_009708  YpsIP31758_3980  osmolarity response regulator  28.7 
 
 
239 aa  55.5  0.0000004  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.75818  n/a   
 
 
-
 
NC_013205  Aaci_2350  two component transcriptional regulator, winged helix family  32.11 
 
 
226 aa  55.8  0.0000004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.275786  n/a   
 
 
-
 
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