Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_2350 |
Symbol | |
ID | 8425879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | - |
Start bp | 2414798 |
End bp | 2415478 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645028469 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003185746 |
Protein GI | 258512312 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.275786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGGCTTT TGGTGGTGGA GGACGAGGCG ACGCTCCGGC GAGAGCTGGT CCAACTGTTT CAACAGCGTG GCTACACCGT GGACGCCGTG GACACGGTGT TCGCGGCGGT GGAGCACGGC ATGAGCGGCG CGTACGACTG CATCGTGCTC GATTACATGC TGCCCGACGG GGACGGGATC GAGGCCCTGA CGCAGCTTCG CGAGGCGGGG TGCACCACGC CCATCCTCAT GCTCACGGTG AAGAACGATC CGAAAGACCG CGTGCTCGGG CTGAACAAGG GCGCGGACGA CTACCTGGGC AAGCCGTTTC ATCCCGACGA GCTCCTCGCC CGGGTGGGGG CGCTCGTCCG GCGCTCGCCC GCGCTCACCG ACGACGAGGT GCTCGAGCAC GGGCGCGCCA AACTGCACAC GCGTTCGCGC AGCCTCGAGT ACGACGGTCG AACCCTGGAA CTCACGAGCA AGGAGTTCGC CCTGATGGAG GCGCTCTTCC GCCACAAGCA CCAGGTCATG ACCCGCGATC AGCTGATCGC GAAGGTCTGG GGTCCGGACG CGGAAGTGGC GGACAGCGCG CTCGACACCT ACATCTACTT CCTGCGAAGG AAGTGCTCCA ACATCGGCTG GAAAAACGCC ATCGTCACGG TGCGCGGCCG GGGCTATGCG CTGCAGCCGG AGGGCGAGTG A
|
Protein sequence | MRLLVVEDEA TLRRELVQLF QQRGYTVDAV DTVFAAVEHG MSGAYDCIVL DYMLPDGDGI EALTQLREAG CTTPILMLTV KNDPKDRVLG LNKGADDYLG KPFHPDELLA RVGALVRRSP ALTDDEVLEH GRAKLHTRSR SLEYDGRTLE LTSKEFALME ALFRHKHQVM TRDQLIAKVW GPDAEVADSA LDTYIYFLRR KCSNIGWKNA IVTVRGRGYA LQPEGE
|
| |