| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5393 |
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| Symbol | |
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| ID | 6978487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011368 |
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| Strand | + |
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| Start bp | 1029262 |
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| End bp | 1035561 |
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| Gene Length | 6300 bp |
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| Protein Length | 2099 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643394495 |
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| Product | GAF sensor hybrid histidine kinase |
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| Protein accession | YP_002279313 |
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| Protein GI | 209547395 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0480029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0859175 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAACC AAACCAGTGA ACGCGCGCGC GACAGTGTCG CGGTAGACAG CCTGAATAGC
CACGACCACA AAACCATGGC ATTCGACGAT GCCAGCGCCC TCCTGGAGGT CCTTGTCGCG
GTCAGGCGCG GCGACTTTTC CGTGCGGATG CGGTCGGATC TGACCGGCGT CACCGGCAAG
ATCGCCGATG CCCTCAATGA CATCATCGCC GGTAATCAGC GAATGGCACA ACAACTGGAG
CATGTCGGCC AGGTCGTCGG CCGGGATGGG CGGACGAGCA CGCGGGTACG TTTCGGCCTG
TCGGACGGGT CCTGGTCCGA GATGGAAGGC TCGATCAACG GCCTGATCGA CGATCTGCTG
TGGCCGACGA CGGCGGTCAC CCGCACGATT ACCGCAGTGG CCAAGGGCGA TCTGCTGCAG
ACCGTGCCGC TCGATGTCGA CGGACGCGCG CTCAAAGGCG AGTTCCTGCG ATCGGCCGAT
ATCGTCAACA CGATGATCAA GCAGCTGAGC GTCTTCACCT CCGAGGTGAC GCGCGTTGCC
CGCGAGGTCG GCACGGACGG AAAACTCGGC GGACAGGCGC AGGTGCCTGA AGTGACCGGC
GTCTGGAAGG ACTTGACCGA AAGCGTCAAC TCGATGGCGT CGAACTTGAC CGCGCAGGTA
CGCAACATCG CCGAGGTGAC GATCGCGGTT GCCAACGGCG ACCTTTCCAA GAAGATCACC
GTCGATGTAC GCGGCGAGAT CCTGCAGCTG AAGGAAGCCA TCAATACCAT GGTCGACCAG
CTGCGCTCCT TCGCTTCGGA AGTAACGCGT GTTGCCCGCG AAGTCGGCAC CGAAGGCAAG
CTCGGCGGCC AGGCGCTGGT GCCGGGTGTC GCCGGCACCT GGAAGGACCT GACCGACTCC
GTCAACGCCA TGTGCGGCAA TCTGACGGCC CAGGTGCGCA ACATTGCCCA GGTGACGACG
GCCGTGGCGC GCGGAGACCT GTCACGCAAG ATCACCGTCG ACGTCTCGGG CGAAATCCTG
GAGCTGAAGG AAACCATCAA CACCATGGTC GATCAGCTCA ACGGCTTTGC CGGCGAGGTG
ACGCGCGTGG CGCGTGAGGT CGGCACCGAA GGCCGGCTCG GCGGCCAGGC GCAGGTGCCG
GGTGTCGCCG GTACCTGGAA GGACCTGACT GACAACGTCA ATTCCATGGC CTCGAACCTC
ACCGCGCAGG TGCGCAACAT CGCCGAGGTG TCGACCGCGA TCGCCAATGG CGACTTGTCG
AAGAAGATCA CGGTGACGGT GTCGGGGGAA ATCCTCGAGT TGAAGGAAAC CATCAATACG
ATGGTCGATC AGCTGAACGC CTTTGCATCG GAAGTCACCC GTGTCGCCCG CGAAGTCGGC
ACCGAGGGCC GGCTCGGCGG CCAGGCCAAT GTGCGCGGCG TTGCCGGCAC CTGGAAGGAT
CTGACCGAAA ACGTCAACTC GATGGGCGGC AACTTGACGG CACAGGTGCG CAACATTGCC
GAGGTGTCGA CCGCGATCGC TAATGGCGAC CTGTCGAAGA AGATCACCGT CGACGTGAAG
GGCGAGATCC TCGAGCTGAA GGAAACCATC AATACGATGG TCGATCAGTT GAACGCCTTC
GCTTCGGAAG TCACCCGCGT CGCCCGCGAA GTCGGAACCG AGGGCCGGCT CGGCGGCCAG
GCCAATGTGC GCGGCGTTGC CGGCACCTGG AAGGATCTGA CCGATAGCGT CAATTCCATG
GCCTCCAACC TGACGGGACA GGTGCGCAAC ATCGCCGAAG TCGCGACCGC CGTCGCCCAG
GGAGACCTTT CCAAGAAGAT CACCGTCACC GTGTCCGGCG AAATCCTCGA GCTGAAGGAG
ACCATCAATA CGATGGTCGA TCAGCTGAAC GGCTTTGCCG GCGAAGTGAC GCGCGTGGCG
CGCGAGGTCG GCACGGAAGG CCGGCTTGGC GGCCAGGCGA ATGTGCTCGG TGTCGCCGGC
ACCTGGAAGG ACCTGACCGA CAGCGTCAAT TCCATGGCGG GAAATCTGAC GGCGCAGGTG
CGCAATATCG CCGAAGTCTC GACCGCGATT GCCAATGGCG ACCTCTCGAA AAAAATCACG
GTGTCGGTCT CGGGGGAAAT CCTTGAACTC AAGGAAACGC TGAACACCAT GGTCGATCAG
CTGAACCGGT TTGCCTCGGA AGTGACGCGC GTCGCCCGCG AAGTCGGCAC CGAAGGCAAG
CTCGGCGGCC AGGCGCAGGT GCCGGGTGTC GCCGGCACCT GGAAGGATCT GACCGAGAAC
GTCAATTCCA TGGCCTCCAA CCTGACCGGC CAGGTGCGCA ACATCGCCGA AGTCACGACG
GCCGTGGCGC GCGGCGACCT GTCGCGCAAG ATCACCGTCG ACGTGAAGGG GGAAATCCTC
GAACTGAAGA ACACCATCAA TACGATGGTG GATCAGCTCA ATGCCTTTGC CGGCGAAGTG
ACGCGTGTGG CGCGCGAAGT CGGCACCGAA GGCAAGCTTG GCGGCCAGGC GCAGGTGTCC
GGTGTCGCCG GCACCTGGAA GGACCTGACC GACAGCGTCA ACTCGATGGC CGGCAATCTG
ACGGCGCAGG TGCGCAATAT CGCCGAGGTG GCGACTGCGA TCGCCAATGG CGACCTGTCG
CGCAAGATCA CCGTCGACGT GCGCGGCGAA ATCCTGCTGC TGAAGGATAC GTTGAATACC
ATGGTCGACC AGCTTCGCTC CTTCGCCGGC GAAGTGACGC GCGTGGCGCG CGAAGTCGGC
ACCGATGGTC GCCTCGGCGG TCAGGCCGTC GTTCCCGGCG TCGCCGGCAC CTGGAAGGAT
CTGACCGACA ACGTCAACCT GCTTGCCGCC AATCTCACGA CCCAGGTTCG CAACATCGCT
GAAGTGACGA CCGCCGTGGC GCGCGGTGAC CTCTCGCGCA AGATCACCGT CGACGTGAAG
GGCGAAATCC TCGAGCTGAA GAACACCATT AACACCATGG TGGACCAGCT CAACGCCTTC
GCCGGCGAAG TGACGCGCGT TGCCCGCGAA GTCGGCACCG AGGGCAAGCT TGGCGGCCAG
GCACAGGTGC CGGGTGTCGC CGGCACCTGG AAGGACCTGA CCGACACCGT CAACGTCATG
GCTGCCAACC TGACCGAGCA GGTGCGCGGC ATCGTCAAGG TGGTGACGGC GGTAGCGAAC
GGCGACCTCA AGCAGAACCT CACCGTCGCC TCCAAGGGCG AGGTGGCAGC GCTCGCCGAA
ACCATCAACA ACATGACCAA CACGCTCGCG ACCTTCGCCG ATCAGGTGAC CACGGTGGCG
CGCGAAGTGG GCGTGGAGGG CCGCCTCGGC GGCCAGGCGA ACGTGCCGGG TACGGCGGGG
ACATGGAAGG ACCTGACCGG CAACGTCAAC CTGCTTGCGG CCAACCTGAC GACGCAGGTG
CGCGCCATTG CCGAGGTGGC CACCGCCGTC ACCAAGGGAG ACCTGACGCG TTCGATCAAG
GTCGATGCGC GCGGCGAAGT CGCCGAGCTC AAAGACAATA TCAACACGAT GATCGACAAC
CTGCGCCTGA CGACGGAGCG CAACACCGAA CAGGACTGGC TGAAGACCAA TCTGGCCCGC
TTCACCAACA TGCTGCAGGG CCAGCGCGAC CTGACGCTGG TCGGCAAGTT GCTGCTGTCG
GAGCTGGCGC CGCTCGTCAG CGCGCATCAG GGAGTGATTT ACCAGGTTGA TGCCGATGAG
GAACAACCGT TCCTGTCGCT TCTGTCGGTC TATGCGCAAG GGGTCGAGGC GGCGCATCCG
CCGCGGCTCG ATTTCGGCCA GGGACTTGTC GGCCAGTGCG CCAGTGATGC CCGCCGAATC
CTTGTCACCG ACCTTCCCGA GAATGTCGTT CCGATCAGTT CCGGCGTGTT CACGACCCTG
CCGCGAAGCG CGATCGTGCT GCCGGTGCAT TTCGAGGGGC AGGTGAAAGC GGTAATCGAG
CTTGCCTCCG CCGGTGAATT CACCGAGCTG CAACTGTCCT TCCTCGACCA ACTGACGACG
TCGATCGGCA TCGTCCTCAA TTCGATCGAG GCGACCATGC AGACCGAAGG CCTGCTCAAG
CAGTCGCAGA AACTCGCCGC AGAGCTGCAG ACGCAGCAGC GTGAGCTGCA GCAGACCAAC
GAGCAGCTCG GACAGAAGGC GCAGCAGCTC GAAGAACGCA ACGTCGAAGT CGAGGCGAAG
AACCAAGAGA TCGAGCAGGC CCGGCGCGCG CTGGAGGAGA AGGCCACCGA GCTGGCCCTG
ACTTCGAAGT ATAAATCCGA ATTCCTCGCC AACATGTCGC ACGAGCTGCG CACGCCTTTG
AATTCGATCC TCATTCTCGG CCAGCAGCTC GGCGAAAATC CCGACGGCAA CCTGTCGGGC
AAACAGGTCG AGTTTGCCAA GACGATCCAT GGCGCCGGAA CCGACCTCTT GAACCTGATT
AGCGATATCC TCGACCTGTC GAAGATCGAA TCCGGAACGG TTTCGGTCGA TGCCGAGGAG
ATTTTCGTCA GCAACCTGCT CGAGGTGATG GCCCGGCCAT TCCGGCACGA GGCGGAAAAC
CGCAGCCTGT CGTTTGCGGT CGAGATCGGC GGTGATGTTA CGAAGAGCAT CATCACGGAT
TCGAAGCGGC TGCAGCAGAT CCTCAAGAAC CTGCTGTCGA ACGCCTTCAA ATTCACCGCG
CAAGGCGGTG TGACGCTTCG CGTCGCGTTG GCAGCGAGTG GCTGGTCGCC GGATCATCCG
TCGCTCCGGC ACGCGCCTTC GGTTATCGCC TTCGAAGTTG TCGACACCGG CATCGGCATC
CCGCCGGAAA AGCAGCGCAT CATCTTCGAG GCGTTCCAGC AAGCGGATGC CTCGACGAGC
CGCAAATATG GCGGCACCGG TCTCGGGCTG GCGATCAGCC GCGAACTGGC AAACCTCCTG
GGCGGCGAGA TCCAGCTGCG CAGCACCCCG GGCGTCGGCA GCACCTTCGT CCTCTATCTG
CCGCTGACCT ATGTCGGTGC CGGCGCGGTC GCGCCGAAGT CCCTTCCATC GGCCAATGTC
GTGGAGTTCG CCGAGGCGGC GGCGAGCCGC CGCGCCGAGA AGACCATCGA ACATGTGGCA
GACGACCGCC ACCAGATAGC GGCCGGCGAC TCGGTGCTGC TCGTCGTCGA GGACGATGCG
CATTATGCCC GTGTCCTGGT CGATCTTGCC CGTGACAGCG GTTTCAAGGT TCTGGTGGCG
ATGCGTGGCA GCGATGCGCT GTCACTCGCG CAGGACTACC GGCCGGCAGC GATCTCGCTC
GACATCTTCC TGCCCGATAT GCTCGGCTGG ACGGTGCTGA GCCAGCTCAA GCAGAATCCG
CAGACGCGGC ATATCCCGGT GCAGATCATC AGCCTCGACG AGGATCGCCA GCATGGGCTG
ACCCGCGGCG CCTTCGCATT CATGAGCAAG CCGACAACGC CCGAGGGCCT CGGCAAGGCG
CTGTCGCGCT TGAAGGCCTA CGCGCAACCG CGCCGCAAGC ATCTGCTGCT GGTGGAAGAC
AATGAGGCCG AGCGGCTGAG CGTCACCGCG CTTCTCGGAC ATGACGACAT TGACATCACA
AGTGTCGGCT CCGGATCGGA AGCGCTTGCC GCTCTCAGGC AGGATCCGCC GGATTGCGTG
GTGCTCGACC TTTCGCTGCC TGACATGTCC GGCTTCGACG TACTGGAGCA GATACGCGAC
GACGCCGAGA TCGGTGAGGT GCCGGTGGTT GTCTTCACGG GCCGAGAGCT TTCCCCTGAG
GAAGATGCGA CGCTGCACAG CATGGCCCGA AGCGTCGTCG TGAAGGGCGT CGAGTCTCCG
GAGCGTCTCC TCGACGAGAC GGCTCTGTTC CTGCACCGGG TCGTCGCCGA CCTGCCGCTT
GCAAAACAGG CGACGCTGCA GGAACTGCAC AGCTCGGACG AGGATCTCGT CGGCGAGACC
GTGCTGCTCG TCGACGACGA TGCCCGCAAT ATCTTTGCGC TGAGCAGCGT GCTGGAGCGC
CGGGGAATGC GGGTGCTGAC GGCCACGACC GGCAGCGAAG CCATCGACGT CATCAACAAC
GAGCCTTCGG TGGCGATCGT GCTGATGGAT ATCATGATGC CGGGAATGGA CGGCTACGAG
ACGATGCAGG TCATCCGTTC GGAGCCACGG TTCCGGCGGC TGCCGATCCT GGCGCTGACG
GCGAAGGCGA TGAAGGGCGA CCGCGAGAAA TGCCTGGAAG CGGGCGCATC CGATTACCTG
GCGAAGCCGG TCAATACCGA GCAGCTTCTG TCGGCGCTTC GCATGTGGCT GCACCGTTGA
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| Protein sequence | MSNQTSERAR DSVAVDSLNS HDHKTMAFDD ASALLEVLVA VRRGDFSVRM RSDLTGVTGK
IADALNDIIA GNQRMAQQLE HVGQVVGRDG RTSTRVRFGL SDGSWSEMEG SINGLIDDLL
WPTTAVTRTI TAVAKGDLLQ TVPLDVDGRA LKGEFLRSAD IVNTMIKQLS VFTSEVTRVA
REVGTDGKLG GQAQVPEVTG VWKDLTESVN SMASNLTAQV RNIAEVTIAV ANGDLSKKIT
VDVRGEILQL KEAINTMVDQ LRSFASEVTR VAREVGTEGK LGGQALVPGV AGTWKDLTDS
VNAMCGNLTA QVRNIAQVTT AVARGDLSRK ITVDVSGEIL ELKETINTMV DQLNGFAGEV
TRVAREVGTE GRLGGQAQVP GVAGTWKDLT DNVNSMASNL TAQVRNIAEV STAIANGDLS
KKITVTVSGE ILELKETINT MVDQLNAFAS EVTRVAREVG TEGRLGGQAN VRGVAGTWKD
LTENVNSMGG NLTAQVRNIA EVSTAIANGD LSKKITVDVK GEILELKETI NTMVDQLNAF
ASEVTRVARE VGTEGRLGGQ ANVRGVAGTW KDLTDSVNSM ASNLTGQVRN IAEVATAVAQ
GDLSKKITVT VSGEILELKE TINTMVDQLN GFAGEVTRVA REVGTEGRLG GQANVLGVAG
TWKDLTDSVN SMAGNLTAQV RNIAEVSTAI ANGDLSKKIT VSVSGEILEL KETLNTMVDQ
LNRFASEVTR VAREVGTEGK LGGQAQVPGV AGTWKDLTEN VNSMASNLTG QVRNIAEVTT
AVARGDLSRK ITVDVKGEIL ELKNTINTMV DQLNAFAGEV TRVAREVGTE GKLGGQAQVS
GVAGTWKDLT DSVNSMAGNL TAQVRNIAEV ATAIANGDLS RKITVDVRGE ILLLKDTLNT
MVDQLRSFAG EVTRVAREVG TDGRLGGQAV VPGVAGTWKD LTDNVNLLAA NLTTQVRNIA
EVTTAVARGD LSRKITVDVK GEILELKNTI NTMVDQLNAF AGEVTRVARE VGTEGKLGGQ
AQVPGVAGTW KDLTDTVNVM AANLTEQVRG IVKVVTAVAN GDLKQNLTVA SKGEVAALAE
TINNMTNTLA TFADQVTTVA REVGVEGRLG GQANVPGTAG TWKDLTGNVN LLAANLTTQV
RAIAEVATAV TKGDLTRSIK VDARGEVAEL KDNINTMIDN LRLTTERNTE QDWLKTNLAR
FTNMLQGQRD LTLVGKLLLS ELAPLVSAHQ GVIYQVDADE EQPFLSLLSV YAQGVEAAHP
PRLDFGQGLV GQCASDARRI LVTDLPENVV PISSGVFTTL PRSAIVLPVH FEGQVKAVIE
LASAGEFTEL QLSFLDQLTT SIGIVLNSIE ATMQTEGLLK QSQKLAAELQ TQQRELQQTN
EQLGQKAQQL EERNVEVEAK NQEIEQARRA LEEKATELAL TSKYKSEFLA NMSHELRTPL
NSILILGQQL GENPDGNLSG KQVEFAKTIH GAGTDLLNLI SDILDLSKIE SGTVSVDAEE
IFVSNLLEVM ARPFRHEAEN RSLSFAVEIG GDVTKSIITD SKRLQQILKN LLSNAFKFTA
QGGVTLRVAL AASGWSPDHP SLRHAPSVIA FEVVDTGIGI PPEKQRIIFE AFQQADASTS
RKYGGTGLGL AISRELANLL GGEIQLRSTP GVGSTFVLYL PLTYVGAGAV APKSLPSANV
VEFAEAAASR RAEKTIEHVA DDRHQIAAGD SVLLVVEDDA HYARVLVDLA RDSGFKVLVA
MRGSDALSLA QDYRPAAISL DIFLPDMLGW TVLSQLKQNP QTRHIPVQII SLDEDRQHGL
TRGAFAFMSK PTTPEGLGKA LSRLKAYAQP RRKHLLLVED NEAERLSVTA LLGHDDIDIT
SVGSGSEALA ALRQDPPDCV VLDLSLPDMS GFDVLEQIRD DAEIGEVPVV VFTGRELSPE
EDATLHSMAR SVVVKGVESP ERLLDETALF LHRVVADLPL AKQATLQELH SSDEDLVGET
VLLVDDDARN IFALSSVLER RGMRVLTATT GSEAIDVINN EPSVAIVLMD IMMPGMDGYE
TMQVIRSEPR FRRLPILALT AKAMKGDREK CLEAGASDYL AKPVNTEQLL SALRMWLHR
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