Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1502 |
Symbol | |
ID | 4081180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1565391 |
End bp | 1565924 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638009869 |
Product | response regulator receiver protein |
Protein accession | YP_616548 |
Protein GI | 103486987 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.233016 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.368331 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGA CGCGCCAATT GCTCATTGTC GAGGATGACG AGGCGTTCGC GCGGACGCTG AAACGCTCGT TCGAGCGGCG CGGCTATGAG GTGTTCGTGG CGGGCAGCTT CGAGGCGATG GACGCGGTGC TGAAGACGGT GCGGCCGGGC TATGCCGTCG TCGACCTGAA GCTCGGCAGC GCGTCGGGGC TCGCCTGCGT GCAGGCGCTG CGCGCGGCCG ACCCGGTGAT GCGGATCGTC GTGCTGACGG GCTTTGCGAG CATCGCCACC GCGGTCGAGG CGATCAAGCT CGGCGCCTCC TATTATCTCG CCAAGCCGTC GAACACCGAC GACATCGAGG CGGCGTTCGA GCGCGCCGAG GGCAACCCCG ACGCCGCGCT CGACGCGCGC CCCTCGTCGA TCAAGACCGT CGAGTGGGAG CATATCCATC AGACGCTGGT CGAAACCGGC TTCAACATCT CCGAAACCGC GCGTCGGCTG GGGATGCACC GGCGCACACT CGCGCGCAAG CTGGAGAAAC GGCAGGTCCG CTGA
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Protein sequence | MSETRQLLIV EDDEAFARTL KRSFERRGYE VFVAGSFEAM DAVLKTVRPG YAVVDLKLGS ASGLACVQAL RAADPVMRIV VLTGFASIAT AVEAIKLGAS YYLAKPSNTD DIEAAFERAE GNPDAALDAR PSSIKTVEWE HIHQTLVETG FNISETARRL GMHRRTLARK LEKRQVR
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