| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4807 |
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| Symbol | |
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| ID | 3679422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 6037533 |
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| End bp | 6041396 |
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| Gene Length | 3864 bp |
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| Protein Length | 1287 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637720164 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_325299 |
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| Protein GI | 75911003 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00341781 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.634217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGAAT TCAACCACTT GCGACTGCAC AATATGCACG GTTCACTAGT GGCAAAAATT
GCGAGTGCGA TCGCCACGTT GGTTAGTAGT TCCATATTAA TTGGCTGGCT GCTCGATGTA
GAACTTCTCA AAATATTTTT TTGGGGTAGT TCAGGGATCA TGACACCGAA TACAGCATTA
TGCTTCGCAC TCTGCGGTAT TTCTGTATGG CTTTTAGTAA CGAAACCGTC GGGGACATCA
CATTCCAGCC AGAGCCACAA GCCCTACCAA AAACTGTCTA GAGCTTTTAG TGTCTCTAAT
ACCATTATTG CTGCGCTGGC AATTTGCGAA TATTTGTGTG GCTGGGAATC GGGAATTGAC
AAACTGTTTT TGGGTGATGT GTTTACTACC ATCAACACAC CACATATGGG GTTGAATACA
GCAATTAATT TTCTCCTCAT AGGTATAGCT TTAGAACTGC TGACTTATCC CCGAAATAAT
CGCAGCTATT GGTATGCTCA GATTCTCACT CTCTTTACCA CAGTGATTTC CTTAGAGGTG
TTTGTCTGCT ATGCCTACAA AGTGAATTTT TTTTACACAA TTAACCCGAA TTTTACCTCG
ATGTCTTTGC AGACAGCATT ATTATTTATA GTGCTGTGTA TTGGCATTTT GTCTGGACAA
TCAGAAAAAG GGCTAATGAA GATAGTGTTT AGCGATAGCT ATGGGGGTTT AATTGCACGT
CGCTTATTAC TAGCAGCGAT TACCGTACCT TTGTTCTTGG GGTGGTTAAT CCTCAAAGGA
CAAAGAGCCG GCAGATACGG CCCAGACTTT GCCGTTTCAG TCTTTGCGGT TATCTTAATT
GTCATTTTTG TGATCATCAT TTGGCAAAAT GCAGTAGTCA TCGAACTTTT GAGCCAACAA
CGCGATCGCG CTCAAGAAAG TTTGAAAGCT TATGAGGAAA AACTGAAAAG CCTTGTCAAT
GCCAATATTA TTGGCATTGC TTTCGCAGAT ATTTACGGTG GTATTCAACA AGCCAACGAA
GCATTTTTGA TGATGGTTGG TTATTCTCAG GAAGACTTAC TTACAGGCAG ACTCAATTGG
AAAAATCTCA CACCACCAGA ATATTTCTAC TTAGATGAGC AAGGTATTGC GGAAGCTCAA
GCCAACCCCA AAGGAGCTTG TACAACTTAT GAAAAAGAGT ACATTCGCCA AGATGGTAGC
CGCATTCCCG TATTAATTGG TTATGTATTG CTAGGAGAAG AGCGCGAAGA ATCCGTTGCC
TTTATTTTAG ACTTAAGCGA ACGCCAACAA GCACAACAGA AAATACTCCA ACTTAATAAA
GATTTACAGC GTCGCGTCGT CGAATTACAA ACTTTATTAG ACATGATACC TATTGGCATT
GGCATAGCAG AAGATGCAGA ATGTCAAAAT ATTAAAATTA ATCCAGCTTT TGCCAAGCAA
TTGCAACTTT CCACAGATGT AAATGCCTCC CTCAGCGCTC CCCCAAATCA AAGACCAACC
ACATTTAAAA TATTTCACGA AGGTAGAGAG CTTTTACCAG CAGAACTTCC CATGCAGTAC
TCTGCGGTTC ACGGTGTAGA AGTATTAGAT TATGAAGTTG ATGTAGTTCA TGAAAATGGC
GAAATCATCA AATTGCTAGA GTACGTTGCC CCACTTTTTG ATGAAGATGG CAAAACTAGA
GGCTGTATTG GTGCCTTTGT AGATATTACA CAACGCAAGC AAGCAGAAGA GTTACTGCGA
AATGAGCAAA AATGGCTAGA AGATGTGTTG AATCTGATGC CAAGACCATT GCTGTTTATT
GAACCAGAAA CAGCACGGGT TACCTTTGCC AATCGTGCCG CCGATGAATT AGCTGGTGGT
AAATTTCCCA GAGGAGTACC AGCCGAAGAG TACCACACTG TATATCATTT CACAGATATC
AATGGTAATC CCATACCCAA TGAGCAGATG CCTGGAGTGC GGGTTGCTAG AGGAGAACGT
CTAGAAGGAT TAGAGTTAGA CTGGCATACC AACGATGAAG TACTATCTTT ACTCATATTT
GCTGATACCT TGCCAGCCAT GCACGGTTAT CCAGCTACCT GTGTAGTAGT ATTTCAAGAT
GTAACTCAGA TCAAGCAGGC AGAAAAAGCT CTGTCCTTGG GTTATCAACG GCTAAAATTA
CTATTTAGTA CAGCTAATGA CCTGTTATCA AGTCAGGAAC CAGTAGCACT GATTGATAGT
TGCTTCCAGA AACTGGCACA GCAAATTGGA CTGGATGTTT ATTTAAACTA CTTGGTAGAA
GACAATTCTC AGTCCATACG TTTAGCTTCT TATCACGGCA TTTGTCCTGA ACTAGCCCAA
AAAATCAAGT TTTTAAAGTT TGGGGAAGCC ATCTGTGGTA CAACTGCTCA GGAACGTCAT
TCCATCGCTT TAGAGAACGT CCAGCAGTCA ACTGACCCTA AAACACAGCT AATCCGCTCT
ATGGGGATTC ATGCTTATTA CAGTTATCCA TTGATTGCTC AAGGCAGACT TTTAGGGACA
CTCTCCTTTG GCAGTCGCAG CCGTACCAGT TTCACCGAAA ATCAAAAGGG GATGATGCAG
GCGGTTTGCG ACCAAATTGC GATCGCTATG GAACGAATGG AACTGATTAA TTCTTTGCAA
CGGCAGACAG AGCAATTAAC AGAAGCCAAT CGCATGAAAG ATGAGTTTTT GGCTATCTTA
TCCCATGAAT TGCGATCGCC ACTCAATGCA ATTCTCGGCT GGGCGCAGTT ATTACAAGCC
CGTAGGCTAA GTGAAGCGCA AACCGCTAAA GGTTTAGAAA CTATCGAGCG CAACGCCAAA
GCTCAAACCC AACTCATTGA AGACTTACTA GATATATCGC GGATGATTAG AGGTAAGTTA
CGTCTCAACG TCCGCACTTG TAACCTCATT CCCATCATTG AAACAACCAT CGAGAATATT
AACCTCGCCG CCCAAGCTAA AGAAATCGAT TTAACATTCT TCTTAGAAAA TCCAGCTACA
GAAAACTTAC CATTCCAGGT TTCCGGTGAT CCAGAACGCT TGCAGCAGGT GATCTGGAAT
TTACTCACAA ATGCCATTAA ATTCACACCC TCCGGCGGCA AAGTAGAAGT GAGACTCACC
AAAAATCCTG GTTGTGAACA AAATGAACTC ATCACCAATA GCTACGCACA AATCCAAGTC
ATCGATACAG GTATAGGTAT TAATTCCAGC TTTCTACCTT ACGTATTTGA CCGCTTTCGC
CAAGCTGATA GTTCCATCAC CAGATCCCAC GGAGGTTTGG GATTAGGTTT AGCGATTGTT
CGCCATCTAG TAGAGTTACA TGGCGGTACA GTTCATGTAC ATAGTCCCGG TGAAGAACAA
GGTTCTACAT TTACAGTCAA ATTACCCCTC CTCTCGGAAA ATAAAGCAAC TACTATCGAG
CCAATTAGCC CAAGAGGGGA ACATTTCACC CCCTTACCTT TATGTCCTTC GCTGTTAGGG
GTGCGGGTGT TAGTAGTAGA TGACGAGTCA GATTCTCGTG ATTTTGTCAG CACAGTATTA
GAGCAATGTC AAGCTCAAGT CAGATCAGTG CCAACAGCAA AAGAGGCATT ACAGATAATT
TCCCAATGGA AACCAGATGT TTTGGTAAGT GATATCGGAA TGCCAGAAGA AGACGGCTAC
TCTCTAATTC GCAAACTACG CTCCTTACCG CCAGAACAAG GGGGAAATAT TCCCGCCACC
GCCTTAACAG CCTACGCCAG AGCCGAGGAC AGAACACGAG CCATTCAAGA AGGATTCCAA
CTACATTTAC CAAAACCCAT TGAACCCACA GAATTGGCTA CAGTCGTCGC CAGTTTAATT
AAGCGTGGTC AGAGACGCGA TTAA
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| Protein sequence | MLEFNHLRLH NMHGSLVAKI ASAIATLVSS SILIGWLLDV ELLKIFFWGS SGIMTPNTAL
CFALCGISVW LLVTKPSGTS HSSQSHKPYQ KLSRAFSVSN TIIAALAICE YLCGWESGID
KLFLGDVFTT INTPHMGLNT AINFLLIGIA LELLTYPRNN RSYWYAQILT LFTTVISLEV
FVCYAYKVNF FYTINPNFTS MSLQTALLFI VLCIGILSGQ SEKGLMKIVF SDSYGGLIAR
RLLLAAITVP LFLGWLILKG QRAGRYGPDF AVSVFAVILI VIFVIIIWQN AVVIELLSQQ
RDRAQESLKA YEEKLKSLVN ANIIGIAFAD IYGGIQQANE AFLMMVGYSQ EDLLTGRLNW
KNLTPPEYFY LDEQGIAEAQ ANPKGACTTY EKEYIRQDGS RIPVLIGYVL LGEEREESVA
FILDLSERQQ AQQKILQLNK DLQRRVVELQ TLLDMIPIGI GIAEDAECQN IKINPAFAKQ
LQLSTDVNAS LSAPPNQRPT TFKIFHEGRE LLPAELPMQY SAVHGVEVLD YEVDVVHENG
EIIKLLEYVA PLFDEDGKTR GCIGAFVDIT QRKQAEELLR NEQKWLEDVL NLMPRPLLFI
EPETARVTFA NRAADELAGG KFPRGVPAEE YHTVYHFTDI NGNPIPNEQM PGVRVARGER
LEGLELDWHT NDEVLSLLIF ADTLPAMHGY PATCVVVFQD VTQIKQAEKA LSLGYQRLKL
LFSTANDLLS SQEPVALIDS CFQKLAQQIG LDVYLNYLVE DNSQSIRLAS YHGICPELAQ
KIKFLKFGEA ICGTTAQERH SIALENVQQS TDPKTQLIRS MGIHAYYSYP LIAQGRLLGT
LSFGSRSRTS FTENQKGMMQ AVCDQIAIAM ERMELINSLQ RQTEQLTEAN RMKDEFLAIL
SHELRSPLNA ILGWAQLLQA RRLSEAQTAK GLETIERNAK AQTQLIEDLL DISRMIRGKL
RLNVRTCNLI PIIETTIENI NLAAQAKEID LTFFLENPAT ENLPFQVSGD PERLQQVIWN
LLTNAIKFTP SGGKVEVRLT KNPGCEQNEL ITNSYAQIQV IDTGIGINSS FLPYVFDRFR
QADSSITRSH GGLGLGLAIV RHLVELHGGT VHVHSPGEEQ GSTFTVKLPL LSENKATTIE
PISPRGEHFT PLPLCPSLLG VRVLVVDDES DSRDFVSTVL EQCQAQVRSV PTAKEALQII
SQWKPDVLVS DIGMPEEDGY SLIRKLRSLP PEQGGNIPAT ALTAYARAED RTRAIQEGFQ
LHLPKPIEPT ELATVVASLI KRGQRRD
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