Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_1133 |
Symbol | |
ID | 8596612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 1237907 |
End bp | 1238560 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003307932 |
Protein GI | 269119755 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATTT TAATTGTAGA AGATGAAGAA AGAATACGTA AAGTAGTTCG TTCTTTTCTT GTAAAAAACG GTTATATCGT AAGAGAGGCC GCTGATGGTG AGGAAGGGCT GGATCTTTTT TATGAATGGA ATCCGGATCT TGTGCTCCTT GATGTTATGA TGCCGAAAAA AGACGGCTAT GAAGTATGCA GAGCCATTAA AAGTGAAAAA ACTACTCCTG TCCTTATGCT TACTGCCAAA ACTCAGGAAG AAGACGAGAT AAGAGGACTT GAAATAGGAG CAGATGATTA TATAAGAAAG CCTTTCAGCC TGAAAATTCT GGAGCTTCGT TTGAAAAACC TTCTGGGTGA TGAGATATAC ACAATAGGAA ACTTTAGATT TTTAAAAAAT GAAAAAAATG TATATTTAAA TGAAAAAATT GTTGATCTTC CTCCAAAGGA ATACGATCTG CTGTTTTATC TTGCCAAAAA CCACAGTAAG ATTTTTTCCA GAGAGCAGAT TCTGAATAAT GTATGGGATC TTCTCTGTGA AAGTGATCCC AGAACAGTAG ATACTCATAT TAAGAATCTG AGAAAGAAAA TAGGACATGA ATATATTACC ACTGTAAAAG GATTTGGATA TAAATTTGAG GTGAAAAATG AAAATAATAT ATAA
|
Protein sequence | MKILIVEDEE RIRKVVRSFL VKNGYIVREA ADGEEGLDLF YEWNPDLVLL DVMMPKKDGY EVCRAIKSEK TTPVLMLTAK TQEEDEIRGL EIGADDYIRK PFSLKILELR LKNLLGDEIY TIGNFRFLKN EKNVYLNEKI VDLPPKEYDL LFYLAKNHSK IFSREQILNN VWDLLCESDP RTVDTHIKNL RKKIGHEYIT TVKGFGYKFE VKNENNI
|
| |