| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2454 |
|---|
| Symbol | |
|---|
| ID | 5058917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 2759361 |
|---|
| End bp | 2760365 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640474712 |
|---|
| Product | response regulator receiver |
|---|
| Protein accession | YP_001159278 |
|---|
| Protein GI | 145594981 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.811467 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.554659 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGGCAG CGGACGGTGT CTCCACGGTC GGCGCCACGG AGGGTGGCGC CACAGACGGA
GTGGCCGACG ACGCATTCGG CCACGGCGAC GCCGTGGCGG TCACCGAACG GTTGTCGCTG
TGCCCCTCGC GGGACAGCTC ACGAACCGAG ACGAGGGTAT CCTCGCCGGC CGGCGCGGTG
CGCAGCACGG GAAGCAGGGC GACCGAGGTC AGTGCGATGC TGGCGGCAGT AGCCGCGAGC
CATCCGAGCG TGGGCGCCCA CCTGCGGAGT GTGCGCACAA TGATCCCTTC CGTCAGCTCC
GCCTATGGTA GCGAGATGGC GCTGATTCTG CTGGTCGAGG ACGACAGCAT CATTACGGCG
GCGCTGTCCC GCGCGCTGAC CGACGCGGGG CATGTCGTGC GGGCCGTCGG CCAGGCGGCC
GAGGCGTTGC GCGTCCTGAC CGGGGAGCCG CCGGATCTGG TGCTCCTCGA CCTCGGGCTG
CCGGACATCG ACGGTACGGA TACGCTCCGT ATGATCCGGT CCATCTCCGA GGTACCGGTC
GTTGTCATCA CCGCCCGCCG GTCGGAGACC GACATCATCC ACCTGCTCAA CTCGGGCGCG
GACGACTACG TCACCAAGCC CTTCTCCGGC GAGCACATCC TGGCCCGCAT CTCGGCGGTG
CTGCGGCGGT ACCGCAGCGG CACCGACCGG GAGGGGCCCG GCGCGATCAC CGTCGGGCCG
CTGGTGATCG GGCGTAAGGA ACGGCGGGTC ACGATGCACG GCAACCCCCT CAAGCTGACC
CGGCGTGAGT ACGACGTACT CACGTACCTG GCTGAGCGGG TCGGGCAGGT GGTGAGTCGG
CGGGAGCTGA TGACCGAGGT CTGGCGGCAG GCCCGAATCG GAGAGGAACA GACGATCGAC
GTCCACATCT CCTGGCTGCG GCGCAAGCTC GGCGAGACGG CTGCCAAGCC GCGGCTGCTG
CACACCGTCC GCGGGGTCGG CGTCATGATG GTCGATCAGA ACTGA
|
|---|
| Protein sequence | MSAADGVSTV GATEGGATDG VADDAFGHGD AVAVTERLSL CPSRDSSRTE TRVSSPAGAV
RSTGSRATEV SAMLAAVAAS HPSVGAHLRS VRTMIPSVSS AYGSEMALIL LVEDDSIITA
ALSRALTDAG HVVRAVGQAA EALRVLTGEP PDLVLLDLGL PDIDGTDTLR MIRSISEVPV
VVITARRSET DIIHLLNSGA DDYVTKPFSG EHILARISAV LRRYRSGTDR EGPGAITVGP
LVIGRKERRV TMHGNPLKLT RREYDVLTYL AERVGQVVSR RELMTEVWRQ ARIGEEQTID
VHISWLRRKL GETAAKPRLL HTVRGVGVMM VDQN
|
|---|
| |