Gene Oter_0463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0463 
Symbol 
ID6208338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp546768 
End bp548696 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content65% 
IMG OID641690085 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_001817353 
Protein GI182412287 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.683271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCC TGACGAGTGA TTCCACCACA GGCGGAGCGA TGTCGCCGGG CGATGTCAGC 
CTCGGACCGT GGGAGAACAG CGCTGACCCC GCGTATTGCC GCGACCTGAA GGGTCGGCTC
ATCGCAGCCA ATCTCTCCTT CGCGCGCAAG TTCGGCCGTC CCCAGACCGG TCTCGCCGGT
TTGCTCATGG CGGAGTTCAT TCACCCGGAC GATCTCGCCG CGTTCAACGC CACGTTCGTC
GAACTCGCGG AGCCGCCCTA CCGTGCCGTT TCGGAGTCCC GCTGGATAAC GCCGCAGGGC
GTGCGCTGGT TTTCCTGGGA AAAGACGTCG ATCCGCGACG CGTCCGGCGC CATCGTCGCC
GTCCGCGGCG TCGGGCGCGA CATCACGCGG CAGCGGATGG CCGAGGAGCA GTTTTATCGG
CTTTCGCGCG CTATCGAGCA GTCGCCGGTC GCGATCGTCA TCACCGATCT CGATGGTCGC
GCGCAATACG TGAACCCGAA GTTCACCGAA GTGTCCGGCC GCACCCTGGA AGACATTCTC
GACCGCAAGA TCGAAGTCCT GCGCGACGGT CATCCCGACG AGGATTCCTA CCGCAAGTTC
TGGGACACCG TGCGCGCGGG CGGCGAATGG CGCGGCGAAC TCGCCACGCG GCGGCCCGAC
GGCACGACCG TGTGGGAATC GGTGAAAGTC TCCTGTCTGC GCAATCCCAC CGGCGAGATT
ACCAATCTCC TGTGCATGCG CGAGGACATC ACCAGCCGGA AAGCCCTCGA GGCGGAACTG
CGGCAGGCGC ACAAGATGGA GAGCCTCGGC ACGCTCGCCG GCGGCATCGC GCATGATTTC
AACAACCTGC TCGCGATTAT TCACGGCTAT TCCGAGTTCT GTCTGCAGGG CGCCGCGGAG
CCGGCGGTGA TGCAGAAAAG CCTGCAGGAA ATCCACCGCG CCGCGCAGCG CGCCAGCGGG
CTCGTGAAGC AGATCCTCAC CTTCAGCCGC AAAGCCGAGA TCCGCTACGC CCCGGTCGAC
CTGAACCAAC TCGCGCGCGA CCTCGTGGCG CTGATGTCCG AGACGTTCCC ACGCACGATC
ACCTTCACCC TCGATCTCGC GGAAAAGTTG CCGCCGCTCC TCGCGGACCA GACCCAAGTG
CAGCAAATCG TGCTCAACCT GTGCGTGAAC GCACGCGACG CGATGCCGGA CGGCGGCTCG
ATCGTCGTGT CCACCGCGAT CCGGCTGGGC GCGGAATTGC AGTCGCGTCA CTACTCCGCC
GAGCCGGTGC GACGCTACGC CTGCCTGAGC ATTGCCGACA GCGGCAGCGG GATGACGCCG
GAAGTTTGCT CGCGCATTTT CGAGCCGTTT TTCACGACAA AACAGTCAAA CCAGGGCACG
GGGCTGGGTC TGGCGGTCGT CTACGGCATC GCGACCAGCC ACAACGGCTT CATCGACGTC
GAAAGCACCG TCGGGATCGG CAGCACGTTC CGCGTCTACC TGCCGCTGGC CAGCGACACC
GCCGCCACCG CCCCGGTGAC CAACAGCAGC GAATTCCCGC CCGGCACGGA ATCGATCCTC
GTGGTCGATG ACGAAGGCCC GCTCCGGATG CTGCTGTCGG CGGCTTTCAC GCGCAAGGGC
TACAAGGTTT GCACCGCCGC CACCGGCTCC GAAGCCATCG AAATCATTTG CGACAAGTCC
CGGCCGCTGG ACGCGGTGCT GCTGGATTTG AACCTCCCCG GCTCGAACGG CGTGCAGGTC
CTGAAAGTCA TCCGCAGCAC CCGGCCGAAC CTGCCGGTTC TGGTCATCAG CGGGCACATC
ACCCCGGAGG TTCGCACTGA ATTTCAGCAG CTTAACCAGC GCGACTTTGT GCAGAAGCCT
TACCGGCTCG ACGAGATCGG CCGGCGTTTG CGCAAGCTGT TCGAACAATC GGCCGAAGGG
CGAAAGTAA
 
Protein sequence
MSTLTSDSTT GGAMSPGDVS LGPWENSADP AYCRDLKGRL IAANLSFARK FGRPQTGLAG 
LLMAEFIHPD DLAAFNATFV ELAEPPYRAV SESRWITPQG VRWFSWEKTS IRDASGAIVA
VRGVGRDITR QRMAEEQFYR LSRAIEQSPV AIVITDLDGR AQYVNPKFTE VSGRTLEDIL
DRKIEVLRDG HPDEDSYRKF WDTVRAGGEW RGELATRRPD GTTVWESVKV SCLRNPTGEI
TNLLCMREDI TSRKALEAEL RQAHKMESLG TLAGGIAHDF NNLLAIIHGY SEFCLQGAAE
PAVMQKSLQE IHRAAQRASG LVKQILTFSR KAEIRYAPVD LNQLARDLVA LMSETFPRTI
TFTLDLAEKL PPLLADQTQV QQIVLNLCVN ARDAMPDGGS IVVSTAIRLG AELQSRHYSA
EPVRRYACLS IADSGSGMTP EVCSRIFEPF FTTKQSNQGT GLGLAVVYGI ATSHNGFIDV
ESTVGIGSTF RVYLPLASDT AATAPVTNSS EFPPGTESIL VVDDEGPLRM LLSAAFTRKG
YKVCTAATGS EAIEIICDKS RPLDAVLLDL NLPGSNGVQV LKVIRSTRPN LPVLVISGHI
TPEVRTEFQQ LNQRDFVQKP YRLDEIGRRL RKLFEQSAEG RK