| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5296 |
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| Symbol | |
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| ID | 6279072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1476258 |
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| End bp | 1478588 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642616382 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001889025 |
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| Protein GI | 187919994 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAACA CGGACCGCCC GCTGCCCTCA GCCGATGCGT TGTTCGAGCA CGCCGCTTGC
GGCCTGCTCG TCACCGATGC CGACGGCCGC ATCCTGCGCG TGAACGCGAC CTTCTGCGGC
TGGCTCGGCT ATGAGAGCGC GGAACTTACC GGGGCGAGGC ATATCCAGGA TCTGCTGAGC
GCCGGCGGCA AGGTGTTCTA TCAAACGCAC TGGGCGCCGC TTCTGCAAAT GCAGGGTTCA
GTGGCCGAGG TCAAGCTGAA CATGGCGCAT CGCGACGGCC ACATGGTGCC GATGCTGCTC
AACGCGGTGC GCCACTGTCA TGGCGACGTG ACTTACCTCG AAGTAGCGGT GCTGATCGTC
GCCGACCGTC ATAAGTACGA GCAGGAGCTG CTGCTCGCGC GGCGCAATGC CGAGGCGTCC
GTGGCCGCGC ATCAGCGCGC GCAGCGCGAA CTGCAGGAAA GCCGCGACGT GCTGAGTCTC
GCCATGCGCG GCGCGCGCAT GGGCGCGTGG TCGCACGAGC CGAAATCGGG CAAGTTCTGG
TGGAGCCGCG AACTCGAAGC GCTCGCAGGC TACGCCGAAG GCCGTTTTGC CGACACGCCC
GGCGGCTTTT TCGAACTGAT TCATCCAGGC GATCTGATCG CGCTGAACGA GGCAGTGGAC
CACGCGGTGG AAAGCGGCGA CGACTATGTC GCCGAGTTCC GCTTTCTGCA CGCGAGCGGC
GACTGGTGCT GGATGGAAGG CCGCGGGCGC GCCACTTACG ACCGCCACGG CGAGCCGCTG
ACGATCTACG GCCTCGGCAT CGACATCACC GAACGCAAGG AAGCGCAGAC GGTCCTGCTG
CGTCAGGCGG CAATCTTCGA GCACCTGAGC GACGCGATTG TGATCACCGA TCTGCGCGGC
AATATCACCG ACTTCAACGT GGGCGGCGAA CGCATGCTGG GTTATCGCAT GCGCGAGATT
CTCGGCAAGC CGGTCGCGCT CTTCCTCCCG CCGGAAGAGA CACTGAACAT TCGCCGCGAA
GCACTTGCCG CCCTCGCCGC CGAAGGCACC TGGCGCGGCG AATTGCCATT CGTGCGGCGC
GACGGTTCGC GCGGCGTGTG CGAGACCGTG ATCAAGCCGC TCGCCAACGC GCGCGGCGAT
ATCTACGGCG CGGTCAGCAT CAATCGCGAC ATTACCGGCC GCCGGCATGC CGAACAGCAA
CTCACGCGGC TGAATCTCGA ACTCTCGAAG GCCGATCGCC GCAAGGACGA ATTCCTCGCC
ACGCTCGCAC ACGAACTGCG CAATCCGCTC GCGCCGATGC GCAACGTGCT CGAGATTCTG
CGCCTGAAGG AATTCGCCGA TCCGCAGTTA AGCTGGTCGC GCGACGTGTT CGACCGGCAA
CTCCAGCACA TGACGCATCT GGTCGACGAC CTGCTGGAAG TCTCGCGTAT CACGCAGGGC
AAGCTGGAGT TGCGCAAACA ACGTCTTGAA CTGGCGCGTG CGATGCAGTC GGCCATGGAA
GCCGCGCGGC CGACCGTGCA GGCCTCGTCG CACCATCTGA GCGTGACGCT GCCCCGCGAG
CCGCTCTATC TGGTCGCCGA TCCCACGCGC CTGTCGCAAA TGATCCTGAA TCTGCTGAAC
AACGCCGCCA AGTACACGCC GCCCGGCGGC ACCATTTCAC TCGCGGCGGA ACGCGACGGC
GACGAGGCGG TGATCGTCGT GCGCGATTCC GGCATCGGCA TTCCGGCCGA GCATCTGAAC
AGCGTGTTCG AAATGTTCTC GCAACTCGCG CCGGCGTTGG ACCGCTCGCA AGGCGGACTC
GGCATCGGCC TCGCGCTGGT GCGCGGCCTC GCGGAACTGC ATGGCGGCAC GGTTGCGGCC
TTCAGTGACG GTCCCGGCAA AGGCAGCGAA TTCGTGATCC GGCTGCCGGT GACGAAAGCC
GCAATGCAGC CGTCCGATAG CGCGCCGGTC GAGGTGCCGC ACGCGGGCGG CCTGCGAGTC
GTGATCGTCG ACGACAATGC GGACGCCGCC GAAAGCCTCG CGATGGTGCT CGGACTCGAA
GGCCATGAGG TGCGCACGGC CGGCGACGGT CTTGCCGGTC TCGAACTGAT TGGCGCATTC
GAGCCGCAGG CGGTGATACT CGACATCGGC TTGCCGCAAC TGAACGGCTA TGAAGTGGCG
CGGCGGATTC GCCAGGATTA TCCGGACGCG GGCATTGTGC TGATCGCCGT CACCGGCTGG
GGCCAGCAAC AGGACAAGCA GACGGCTCTC GCCGCGGGCT TCGACCATCA CTTCACGAAG
CCGGTCGATC CAGGCGAGTT GCAGCGGGTG TTGAGCCGGC AGCGGGTATG A
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| Protein sequence | MHNTDRPLPS ADALFEHAAC GLLVTDADGR ILRVNATFCG WLGYESAELT GARHIQDLLS
AGGKVFYQTH WAPLLQMQGS VAEVKLNMAH RDGHMVPMLL NAVRHCHGDV TYLEVAVLIV
ADRHKYEQEL LLARRNAEAS VAAHQRAQRE LQESRDVLSL AMRGARMGAW SHEPKSGKFW
WSRELEALAG YAEGRFADTP GGFFELIHPG DLIALNEAVD HAVESGDDYV AEFRFLHASG
DWCWMEGRGR ATYDRHGEPL TIYGLGIDIT ERKEAQTVLL RQAAIFEHLS DAIVITDLRG
NITDFNVGGE RMLGYRMREI LGKPVALFLP PEETLNIRRE ALAALAAEGT WRGELPFVRR
DGSRGVCETV IKPLANARGD IYGAVSINRD ITGRRHAEQQ LTRLNLELSK ADRRKDEFLA
TLAHELRNPL APMRNVLEIL RLKEFADPQL SWSRDVFDRQ LQHMTHLVDD LLEVSRITQG
KLELRKQRLE LARAMQSAME AARPTVQASS HHLSVTLPRE PLYLVADPTR LSQMILNLLN
NAAKYTPPGG TISLAAERDG DEAVIVVRDS GIGIPAEHLN SVFEMFSQLA PALDRSQGGL
GIGLALVRGL AELHGGTVAA FSDGPGKGSE FVIRLPVTKA AMQPSDSAPV EVPHAGGLRV
VIVDDNADAA ESLAMVLGLE GHEVRTAGDG LAGLELIGAF EPQAVILDIG LPQLNGYEVA
RRIRQDYPDA GIVLIAVTGW GQQQDKQTAL AAGFDHHFTK PVDPGELQRV LSRQRV
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