| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2259 |
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| Symbol | ompR |
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| ID | 7083691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 2544444 |
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| End bp | 2545217 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643699278 |
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| Product | osmolarity response regulator |
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| Protein accession | YP_002355894 |
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| Protein GI | 217970660 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0634187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACCAGA AAAACCGCTA TCGCATTCTC GTGGTGGATG ACGACGCGCG CCTGCGCGAG
TTGCTGTCCC GATACCTTCA GGAACAAGGC TTTTCGGTGA AGGCCGTCGG CGATGCGCCG
ATGATGGATC GCGCCCTGCA CCGCGAGCAT TACGACCTGA TCGTGCTCGA CCTGATGCTG
CCCGGCGAGG ACGGGCTGTC GATCTGTCGC CGGCTGCGCG CGGCCGAGAA CCAGATCCCG
GTCATCATGC TCACCGCCAA GGGTGACGAC GTGGATCGCA TCGTCGGGCT GGAGATGGGC
GCCGACGACT ACGTCGCGAA GCCCTTCAAC CCGCGTGAGC TGGTGGCGCG TATCCAGGCG
GTGATGCGTC GCCAGCCCCA CACCCTGCCG GGCGCGCCCA CCCCCGAGGA CGAGATCGTC
GCGTTTGGCC GGGTCAAGGT GAACCTGGGC ACCCGCGTGC TTGTCCGCGA TGGCGAGGAG
ATTCAGCTCA CCACCGGCGA ATTCTCGCTG CTCAAGGTGC TGCTAACCCA CCCGCGCCAG
CCGCTGTCCC GCGACAAGTT GATGGAACTC GCGCGCGGGC GCGAGTACGG TGTGTTCGAC
CGGGCGATCG ACGTCCAGGT CTCGCGCCTG CGCAAGCTGG TCGAGGACGA TCCCGCCAAG
CCGCGCTACA TCCAGACCGT GTGGGGTTTC GGCTACGTCT TCGTGCCCGA TGAGCAAAAG
GGCGGCGAGG ACAACGGCGG GCAGCCGGAC ACCCCGGCCG GCGGCGAGGA CTGA
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| Protein sequence | MNQKNRYRIL VVDDDARLRE LLSRYLQEQG FSVKAVGDAP MMDRALHREH YDLIVLDLML
PGEDGLSICR RLRAAENQIP VIMLTAKGDD VDRIVGLEMG ADDYVAKPFN PRELVARIQA
VMRRQPHTLP GAPTPEDEIV AFGRVKVNLG TRVLVRDGEE IQLTTGEFSL LKVLLTHPRQ
PLSRDKLMEL ARGREYGVFD RAIDVQVSRL RKLVEDDPAK PRYIQTVWGF GYVFVPDEQK
GGEDNGGQPD TPAGGED
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