More than 300 homologs were found in PanDaTox collection
for query gene Dhaf_3949 on replicon NC_011830
Organism: Desulfitobacterium hafniense DCB-2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011830  Dhaf_3949  two component transcriptional regulator, winged helix family  100 
 
 		 219 aa  437  9.999999999999999e-123  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_0358  two component transcriptional regulator  44.89 
 
 		 229 aa  184  9e-46  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_008262  CPR_1020  DNA-binding response regulator  39.64 
 
 		 229 aa  166  2e-40  Clostridium perfringens SM101  Bacteria  hitchhiker  0.00028316  n/a   
 
 
-
 
NC_013204  Elen_2295  two component transcriptional regulator, winged helix family  40.69 
 
 		 237 aa  165  5e-40  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008261  CPF_1192  DNA-binding response regulator  39.64 
 
 		 229 aa  164  6.9999999999999995e-40  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.00982401  n/a   
 
 
-
 
NC_011898  Ccel_2324  two component transcriptional regulator, winged helix family  41.18 
 
 		 226 aa  161  7e-39  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_013204  Elen_0682  two component transcriptional regulator, winged helix family  40.85 
 
 		 243 aa  155  4e-37  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013525  Tter_1435  two component transcriptional regulator, winged helix family  37.39 
 
 		 233 aa  148  7e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_0960  two component transcriptional regulator  40.54 
 
 		 236 aa  141  6e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.0214647 
 
 
-
 
NC_011661  Dtur_0154  two component transcriptional regulator, winged helix family  36.32 
 
 		 220 aa  141  6e-33  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.443854  n/a   
 
 
-
 
NC_009523  RoseRS_3485  two component transcriptional regulator  40.54 
 
 		 236 aa  141  7e-33  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013161  Cyan8802_4261  two component transcriptional regulator, winged helix family  38.84 
 
 		 224 aa  141  9e-33  Cyanothece sp. PCC 8802  Bacteria  normal  0.906422  normal  0.0109867 
 
 
-
 
NC_009523  RoseRS_2625  two component transcriptional regulator  36.65 
 
 		 231 aa  141  9e-33  Roseiflexus sp. RS-1  Bacteria  normal  0.983258  normal  1 
 
 
-
 
NC_009921  Franean1_3859  two component transcriptional regulator  35.75 
 
 		 235 aa  140  9.999999999999999e-33  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal  1 
 
 
-
 
NC_002939  GSU0451  DNA-binding response regulator  33.94 
 
 		 224 aa  140  1.9999999999999998e-32  Geobacter sulfurreducens PCA  Bacteria  normal  0.313098  n/a   
 
 
-
 
NC_007498  Pcar_3081  two component signal transduction response regulator  33.94 
 
 		 223 aa  139  1.9999999999999998e-32  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_008578  Acel_1595  two component transcriptional regulator  36.44 
 
 		 227 aa  140  1.9999999999999998e-32  Acidothermus cellulolyticus 11B  Bacteria  normal  0.526383  normal  0.570373 
 
 
-
 
NC_011726  PCC8801_4222  two component transcriptional regulator, winged helix family  38.84 
 
 		 224 aa  139  3e-32  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013216  Dtox_1554  two component transcriptional regulator, winged helix family  37.67 
 
 		 229 aa  139  3.9999999999999997e-32  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  hitchhiker  0.00709514 
 
 
-
 
NC_011146  Gbem_0243  two component transcriptional regulator, winged helix family  35.27 
 
 		 224 aa  139  3.9999999999999997e-32  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.000226454  n/a   
 
 
-
 
NC_012918  GM21_0227  two component transcriptional regulator, winged helix family  35.27 
 
 		 224 aa  139  3.9999999999999997e-32  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  40 
 
 		 229 aa  139  4.999999999999999e-32  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007517  Gmet_3383  two component transcriptional regulator  33.93 
 
 		 224 aa  138  4.999999999999999e-32  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011898  Ccel_1157  two component transcriptional regulator, winged helix family  36.28 
 
 		 233 aa  138  6e-32  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_0187  two component transcriptional regulator  35.45 
 
 		 227 aa  138  7e-32  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_2401  two component transcriptional regulator  35.59 
 
 		 283 aa  138  7.999999999999999e-32  Frankia sp. CcI3  Bacteria  normal  0.0476592  normal  0.0197415 
 
 
-
 
NC_011830  Dhaf_1237  two component transcriptional regulator, winged helix family  37.28 
 
 		 234 aa  137  8.999999999999999e-32  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.178035  n/a   
 
 
-
 
NC_013204  Elen_1170  two component transcriptional regulator, winged helix family  35.48 
 
 		 220 aa  137  1e-31  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  0.454571 
 
 
-
 
NC_008346  Swol_1681  response regulator receiver protein  40 
 
 		 227 aa  136  2e-31  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.0956507  n/a   
 
 
-
 
NC_008699  Noca_4046  response regulator receiver  37.1 
 
 		 225 aa  136  2e-31  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_2242  two component transcriptional regulator, winged helix family  36.53 
 
 		 224 aa  136  3.0000000000000003e-31  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.415885 
 
 
-
 
NC_010184  BcerKBAB4_2313  two component transcriptional regulator  36.44 
 
 		 228 aa  135  4e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0313786  n/a   
 
 
-
 
NC_009972  Haur_2358  two component transcriptional regulator  38.18 
 
 		 231 aa  135  6.0000000000000005e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0136772  n/a   
 
 
-
 
NC_010320  Teth514_1155  two component transcriptional regulator  34.53 
 
 		 231 aa  134  9.999999999999999e-31  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000000430064  n/a   
 
 
-
 
NC_007413  Ava_0615  two component transcriptional regulator  34.7 
 
 		 228 aa  134  9.999999999999999e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0841359  normal  0.719107 
 
 
-
 
NC_007413  Ava_4085  two component transcriptional regulator  35.71 
 
 		 225 aa  134  9.999999999999999e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.320847 
 
 
-
 
NC_009523  RoseRS_2290  two component transcriptional regulator  36.49 
 
 		 224 aa  134  9.999999999999999e-31  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_3737  two component transcriptional regulator  36.16 
 
 		 231 aa  134  9.999999999999999e-31  Roseiflexus sp. RS-1  Bacteria  normal  1  hitchhiker  0.00273603 
 
 
-
 
NC_008025  Dgeo_2149  two component transcriptional regulator  37.9 
 
 		 221 aa  134  9.999999999999999e-31  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_4293  two component transcriptional regulator  34.23 
 
 		 224 aa  134  9.999999999999999e-31  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000934276  n/a   
 
 
-
 
NC_014210  Ndas_4549  two component transcriptional regulator, winged helix family  36.82 
 
 		 221 aa  133  1.9999999999999998e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.703481  normal  1 
 
 
-
 
NC_008146  Mmcs_4301  two component transcriptional regulator  36.28 
 
 		 230 aa  133  1.9999999999999998e-30  Mycobacterium sp. MCS  Bacteria  normal  0.681825  n/a   
 
 
-
 
NC_014158  Tpau_3286  two component transcriptional regulator, winged helix family  36.28 
 
 		 228 aa  133  1.9999999999999998e-30  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.167791  n/a   
 
 
-
 
NC_011772  BCG9842_B2021  regulatory protein VanR  35.11 
 
 		 228 aa  133  1.9999999999999998e-30  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008705  Mkms_4387  two component transcriptional regulator  36.28 
 
 		 230 aa  133  1.9999999999999998e-30  Mycobacterium sp. KMS  Bacteria  normal  0.0316317  normal  1 
 
 
-
 
NC_009077  Mjls_4681  two component transcriptional regulator  36.28 
 
 		 230 aa  133  1.9999999999999998e-30  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.354926 
 
 
-
 
NC_011661  Dtur_0537  two component transcriptional regulator, winged helix family  35.87 
 
 		 224 aa  132  3e-30  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0716782  n/a   
 
 
-
 
NC_009565  TBFG_10613  two component system DNA binding transcriptional regulatory protein tcrA  32.29 
 
 		 253 aa  132  3e-30  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000499525  normal  0.750249 
 
 
-
 
NC_009674  Bcer98_3233  two component transcriptional regulator  36.44 
 
 		 230 aa  133  3e-30  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1665  two component transcriptional regulator, winged helix family  35.09 
 
 		 232 aa  132  3.9999999999999996e-30  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0130  two component transcriptional regulator, winged helix family  34.82 
 
 		 224 aa  132  3.9999999999999996e-30  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00147609  n/a   
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  35.48 
 
 		 236 aa  132  5e-30  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008010  Dgeo_2844  two component transcriptional regulator  36.77 
 
 		 248 aa  132  5e-30  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
NC_008578  Acel_1449  two component transcriptional regulator  35.45 
 
 		 246 aa  132  5e-30  Acidothermus cellulolyticus 11B  Bacteria  normal  0.566781  normal  1 
 
 
-
 
NC_010320  Teth514_0766  two component transcriptional regulator  34.08 
 
 		 231 aa  132  6e-30  Thermoanaerobacter sp. X514  Bacteria  normal  0.585906  n/a   
 
 
-
 
NC_007333  Tfu_2496  response regulator receiver  35.78 
 
 		 225 aa  132  6e-30  Thermobifida fusca YX  Bacteria  normal  0.491467  n/a   
 
 
-
 
NC_007644  Moth_1478  two component transcriptional regulator  34.84 
 
 		 240 aa  131  6e-30  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.0000111909  normal  1 
 
 
-
 
NC_011729  PCC7424_4628  two component transcriptional regulator, winged helix family  37.5 
 
 		 224 aa  132  6e-30  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.000289587 
 
 
-
 
NC_008528  OEOE_0119  DNA-binding response regulator  35.37 
 
 		 230 aa  131  6.999999999999999e-30  Oenococcus oeni PSU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013124  Afer_0558  two component transcriptional regulator, winged helix family  35.84 
 
 		 237 aa  131  7.999999999999999e-30  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_009565  TBFG_10999  two component response transcriptional regulatory protein MprA  34.51 
 
 		 230 aa  131  7.999999999999999e-30  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00000000188235  normal  0.671639 
 
 
-
 
NC_013501  Rmar_0987  two component transcriptional regulator, winged helix family  37 
 
 		 233 aa  131  7.999999999999999e-30  Rhodothermus marinus DSM 4252  Bacteria  normal  0.195539  n/a   
 
 
-
 
NC_010718  Nther_0984  two component transcriptional regulator, winged helix family  36.51 
 
 		 246 aa  131  7.999999999999999e-30  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.0723779 
 
 
-
 
NC_010001  Cphy_0196  two component transcriptional regulator  36.65 
 
 		 226 aa  131  9e-30  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_010831  Cphamn1_0990  two component transcriptional regulator, winged helix family  35.71 
 
 		 222 aa  130  1.0000000000000001e-29  Chlorobium phaeobacteroides BS1  Bacteria  hitchhiker  0.000957791  decreased coverage  0.0000715536 
 
 
-
 
NC_009719  Plav_0399  two component transcriptional regulator  36.2 
 
 		 272 aa  131  1.0000000000000001e-29  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.802217  normal  1 
 
 
-
 
NC_007643  Rru_A0603  two component transcriptional regulator  33.04 
 
 		 233 aa  130  1.0000000000000001e-29  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0519325  n/a   
 
 
-
 
NC_007802  Jann_3491  two component transcriptional regulator  35.91 
 
 		 219 aa  130  1.0000000000000001e-29  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.0557217 
 
 
-
 
NC_011725  BCB4264_A0316  DNA-binding response regulator  34.36 
 
 		 237 aa  131  1.0000000000000001e-29  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_2487  two component transcriptional regulator  35.59 
 
 		 224 aa  131  1.0000000000000001e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.431556  normal  1 
 
 
-
 
NC_013947  Snas_5144  two component transcriptional regulator, winged helix family  33.33 
 
 		 236 aa  130  1.0000000000000001e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.204078  normal  0.858106 
 
 
-
 
NC_011071  Smal_0824  two component transcriptional regulator, winged helix family  34.38 
 
 		 229 aa  130  1.0000000000000001e-29  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010180  BcerKBAB4_5511  two component transcriptional regulator  33.19 
 
 		 236 aa  130  1.0000000000000001e-29  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  normal  0.567595 
 
 
-
 
NC_011884  Cyan7425_2927  two component transcriptional regulator, winged helix family  37.95 
 
 		 224 aa  130  1.0000000000000001e-29  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_3069  two component transcriptional regulator  35.53 
 
 		 230 aa  130  1.0000000000000001e-29  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.0000000467461  n/a   
 
 
-
 
NC_013739  Cwoe_4508  two component transcriptional regulator, winged helix family  35.59 
 
 		 231 aa  131  1.0000000000000001e-29  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_1504  two component transcriptional regulator  35.56 
 
 		 231 aa  130  2.0000000000000002e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.263867  normal  0.57819 
 
 
-
 
NC_013172  Bfae_20650  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  35.32 
 
 		 231 aa  129  2.0000000000000002e-29  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0260682  n/a   
 
 
-
 
NC_011884  Cyan7425_3411  two component transcriptional regulator, winged helix family  33.33 
 
 		 224 aa  130  2.0000000000000002e-29  Cyanothece sp. PCC 7425  Bacteria  normal  0.591115  normal  1 
 
 
-
 
NC_011772  BCG9842_B4998  DNA-binding response regulator  33.48 
 
 		 237 aa  130  2.0000000000000002e-29  Bacillus cereus G9842  Bacteria  normal  0.709524  normal  1 
 
 
-
 
NC_008228  Patl_0218  two component transcriptional regulator  36.36 
 
 		 239 aa  130  2.0000000000000002e-29  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  36.44 
 
 		 226 aa  130  2.0000000000000002e-29  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0266  two component transcriptional regulator  35.24 
 
 		 237 aa  130  2.0000000000000002e-29  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.262207  n/a   
 
 
-
 
NC_010320  Teth514_1997  two component transcriptional regulator  40.44 
 
 		 234 aa  130  2.0000000000000002e-29  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000000742772  n/a   
 
 
-
 
NC_013510  Tcur_4043  two component transcriptional regulator, winged helix family  35.78 
 
 		 225 aa  130  2.0000000000000002e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  0.728877  n/a   
 
 
-
 
NC_013132  Cpin_4933  two component transcriptional regulator, winged helix family  37.5 
 
 		 224 aa  129  2.0000000000000002e-29  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.742602  normal  1 
 
 
-
 
NC_009664  Krad_3036  two component transcriptional regulator, winged helix family  33.48 
 
 		 273 aa  129  2.0000000000000002e-29  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.106658  normal  1 
 
 
-
 
NC_009654  Mmwyl1_0419  two component transcriptional regulator  33.63 
 
 		 229 aa  129  3e-29  Marinomonas sp. MWYL1  Bacteria  normal  0.509677  normal  1 
 
 
-
 
NC_013203  Apar_0090  two component transcriptional regulator, winged helix family  35.87 
 
 		 226 aa  129  3e-29  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007604  Synpcc7942_1873  two component transcriptional regulator  36.65 
 
 		 226 aa  129  3e-29  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009513  Lreu_0117  two component transcriptional regulator  36.09 
 
 		 229 aa  129  3e-29  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.0000111014  n/a   
 
 
-
 
NC_007947  Mfla_0489  two component transcriptional regulator  36.32 
 
 		 228 aa  129  3e-29  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_0905  two component transcriptional regulator  36.52 
 
 		 238 aa  129  3e-29  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_2675  DNA-binding response regulator  35.75 
 
 		 224 aa  129  4.0000000000000003e-29  Bacillus cereus ATCC 10987  Bacteria  normal  0.0180828  n/a   
 
 
-
 
NC_011138  MADE_03384  response regulator  31.19 
 
 		 221 aa  129  4.0000000000000003e-29  Alteromonas macleodii 'Deep ecotype'  Bacteria  hitchhiker  0.000742618  n/a   
 
 
-
 
NC_011886  Achl_1791  two component transcriptional regulator, winged helix family  38.64 
 
 		 240 aa  129  5.0000000000000004e-29  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000000442123 
 
 
-
 
NC_013132  Cpin_4882  two component transcriptional regulator, winged helix family  34.84 
 
 		 224 aa  129  5.0000000000000004e-29  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013171  Apre_1215  two component transcriptional regulator, winged helix family  33.48 
 
 		 237 aa  128  6e-29  Anaerococcus prevotii DSM 20548  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A1277  two component transcriptional regulator  36.04 
 
 		 233 aa  128  6e-29  Methylibium petroleiphilum PM1  Bacteria  normal  0.0649233  normal  0.253886 
 
 
-
 
NC_009012  Cthe_2813  two component transcriptional regulator  36 
 
 		 231 aa  128  6e-29  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00000151023  n/a   
 
 
-
 
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