| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_3411 |
|---|
| Symbol | |
|---|
| ID | 7289348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 3365223 |
|---|
| End bp | 3365897 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643586383 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002484096 |
|---|
| Protein GI | 220908785 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.591115 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCC ATATTCTTTT GGTTGAAGAT GAAGTCAAAC TGGCCCGGTT TATTCAACTG
GAGCTAGATA GTGAAGGGTA TCGCGTTACG GTTGCCCACG ATGGCATGTC AGGACTTTCT
CTAGCCCGCG AAGCCCAACC GGACTTAGCC ATTCTGGATT GGATGCTACC GGGATTAACG
GGGATTGAAC TCTGTCGGCG ACTGCGGGCC ACGGGGAATA AGATCCCTGT CATTTTGCTC
ACCGCCCGAG ATGAAGTGGG CGATCGGGTG ACGGGACTGG ATGCTGGAGC AGATGATTAT
GTGGTCAAAC CGTTCAGCAT CGAAGAATTG CTGGCCCGGA TTCGTGCCCA CCTGCGCCGC
ACTCAGGAAG TCGATGAAGA TATCCTGCAG TTTGAGGACT TGAGTTTGAA TCGACGCACT
CGAGAAGTCC GGCGGGGGCA GCGATCGATT GAACTCACCG CCAAAGAATT TGATTTACTG
GAATACCTGC TCAGCAATCC CCGCCAGGTT TACACCCGCG ATCAGATTCT AGAAAAAGTT
TGGGGATACG ATTTTATGGG AGATTCCAAC ATCATTGAGG TTTATGTGCG CTATCTCCGC
TTGAAGTTAG AAGAACAGGG CGAAAAACGC TTAATTCATA CTGTGAGAGG GGTAGGATAT
GCCTTGCGGG AATAA
|
|---|
| Protein sequence | MTAHILLVED EVKLARFIQL ELDSEGYRVT VAHDGMSGLS LAREAQPDLA ILDWMLPGLT
GIELCRRLRA TGNKIPVILL TARDEVGDRV TGLDAGADDY VVKPFSIEEL LARIRAHLRR
TQEVDEDILQ FEDLSLNRRT REVRRGQRSI ELTAKEFDLL EYLLSNPRQV YTRDQILEKV
WGYDFMGDSN IIEVYVRYLR LKLEEQGEKR LIHTVRGVGY ALRE
|
|---|
| |